Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm28693-201ENSMUST00000189622 2638 ntBASIC15.34■□□□□ 0.05
Cux1P53564 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cux1P53564 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cux1P53564 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cux1P53564 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cux1P53564 Gm44369-201ENSMUST00000204543 2175 ntBASIC15.34■□□□□ 0.05
Cux1P53564 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cux1P53564 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cux1P53564 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Cux1P53564 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC15.33■□□□□ 0.05
Cux1P53564 Esd-201ENSMUST00000022573 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cux1P53564 Ripply1-201ENSMUST00000101217 811 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cux1P53564 Gm11703-201ENSMUST00000118352 483 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Gm12411-201ENSMUST00000119140 483 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Gm15921-201ENSMUST00000119542 483 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Gm12019-201ENSMUST00000121258 532 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Gm13370-201ENSMUST00000121309 483 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Gm15682-201ENSMUST00000121563 483 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Pip5k1bos-201ENSMUST00000126936 684 ntTSL 3 BASIC15.33■□□□□ 0.05
Cux1P53564 Gm10163-201ENSMUST00000155008 481 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Gm16416-201ENSMUST00000179660 483 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Gm28676-201ENSMUST00000188990 591 ntTSL 5 BASIC15.33■□□□□ 0.05
Cux1P53564 Rpl21-ps1-201ENSMUST00000193804 480 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Gm4478-201ENSMUST00000218322 483 ntBASIC15.33■□□□□ 0.05
Cux1P53564 AC154693.1-201ENSMUST00000223821 523 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Rpl21-ps10-201ENSMUST00000071237 480 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Rpl21-ps11-201ENSMUST00000077278 480 ntBASIC15.33■□□□□ 0.05
Cux1P53564 Gm10240-201ENSMUST00000089785 483 ntBASIC15.33■□□□□ 0.05
Cux1P53564 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cux1P53564 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cux1P53564 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Sept2-215ENSMUST00000179353 3219 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cux1P53564 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC15.33■□□□□ 0.04
Cux1P53564 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cux1P53564 n-R5s2-201ENSMUST00000101968 119 ntBASIC15.33■□□□□ 0.04
Cux1P53564 n-R5s194-201ENSMUST00000104719 119 ntBASIC15.33■□□□□ 0.04
Cux1P53564 Gm13784-201ENSMUST00000119639 519 ntBASIC15.33■□□□□ 0.04
Cux1P53564 Taar7c-ps-201ENSMUST00000122123 1055 ntBASIC15.33■□□□□ 0.04
Cux1P53564 Gm11988-201ENSMUST00000122321 1069 ntBASIC15.33■□□□□ 0.04
Cux1P53564 Gm6286-201ENSMUST00000145247 762 ntBASIC15.33■□□□□ 0.04
Cux1P53564 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC15.33■□□□□ 0.04
Cux1P53564 Gm26445-201ENSMUST00000177557 109 ntBASIC15.33■□□□□ 0.04
Cux1P53564 n-R5s112-201ENSMUST00000178208 119 ntBASIC15.33■□□□□ 0.04
Cux1P53564 n-R5s125-201ENSMUST00000179377 119 ntBASIC15.33■□□□□ 0.04
Cux1P53564 n-R5s120-201ENSMUST00000180000 119 ntBASIC15.33■□□□□ 0.04
Cux1P53564 2410021H03Rik-201ENSMUST00000187090 764 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Gm8704-201ENSMUST00000197181 435 ntBASIC15.33■□□□□ 0.04
Cux1P53564 Gm43551-201ENSMUST00000197221 440 ntBASIC15.33■□□□□ 0.04
Cux1P53564 Gm3922-201ENSMUST00000200519 435 ntBASIC15.33■□□□□ 0.04
Cux1P53564 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC15.33■□□□□ 0.04
Cux1P53564 Gm44166-201ENSMUST00000204070 515 ntTSL 5 BASIC15.33■□□□□ 0.04
Cux1P53564 Gm32858-201ENSMUST00000205246 585 ntBASIC15.33■□□□□ 0.04
Cux1P53564 Gm34664-202ENSMUST00000207661 1032 ntTSL 5 BASIC15.33■□□□□ 0.04
Cux1P53564 Cd2-201ENSMUST00000029456 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cux1P53564 n-R5s33-201ENSMUST00000093713 119 ntBASIC15.33■□□□□ 0.04
Cux1P53564 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Disp2-203ENSMUST00000110843 2949 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Clec4f-201ENSMUST00000014686 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Gpcpd1-201ENSMUST00000028822 3179 ntTSL 5 BASIC15.32■□□□□ 0.04
Cux1P53564 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Gp1ba-201ENSMUST00000055184 2710 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cux1P53564 Gm34821-202ENSMUST00000209114 1949 ntTSL 5 BASIC15.32■□□□□ 0.04
Cux1P53564 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Tmem144-202ENSMUST00000168038 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 AC104200.1-201ENSMUST00000224527 1746 ntBASIC15.32■□□□□ 0.04
Cux1P53564 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cux1P53564 Gprc5d-201ENSMUST00000032327 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Gm22659-201ENSMUST00000104195 130 ntBASIC15.32■□□□□ 0.04
Cux1P53564 Gm9434-201ENSMUST00000118975 813 ntBASIC15.32■□□□□ 0.04
Cux1P53564 Gm15607-201ENSMUST00000119632 358 ntBASIC15.32■□□□□ 0.04
Cux1P53564 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC15.32■□□□□ 0.04
Cux1P53564 Gm14332-201ENSMUST00000121982 899 ntBASIC15.32■□□□□ 0.04
Cux1P53564 4930528P14Rik-201ENSMUST00000152815 509 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cux1P53564 Gm28922-201ENSMUST00000189785 308 ntBASIC15.32■□□□□ 0.04
Cux1P53564 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cux1P53564 Gm43572-201ENSMUST00000196494 519 ntTSL 2 BASIC15.32■□□□□ 0.04
Cux1P53564 Gm42915-201ENSMUST00000197478 323 ntBASIC15.32■□□□□ 0.04
Cux1P53564 Gm43442-201ENSMUST00000202865 414 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms