Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Hmgb3O54879 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC8.26□□□□□ -1.09
Hmgb3O54879 Gm9387-201ENSMUST00000098624 1320 ntBASIC8.26□□□□□ -1.09
Hmgb3O54879 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb3O54879 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Hmgb3O54879 Fkbp5-202ENSMUST00000114792 3858 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Hmgb3O54879 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Mertk-201ENSMUST00000014505 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Pwp1-201ENSMUST00000001836 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb3O54879 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
Hmgb3O54879 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Lrrc14b-201ENSMUST00000022064 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb3O54879 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm20735-201ENSMUST00000212077 1979 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm12645-201ENSMUST00000117297 275 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm13019-201ENSMUST00000120000 276 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm11544-201ENSMUST00000120215 382 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm12035-201ENSMUST00000121890 623 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm10051-201ENSMUST00000145209 414 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC8.25□□□□□ -1.09
Hmgb3O54879 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Mir6927-201ENSMUST00000184494 71 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC8.25□□□□□ -1.09
Hmgb3O54879 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm4430-202ENSMUST00000193902 1041 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm6069-201ENSMUST00000196501 463 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm5281-201ENSMUST00000197542 2134 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm18164-201ENSMUST00000213769 927 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm18166-201ENSMUST00000215557 927 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Gm9102-201ENSMUST00000219250 465 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 AC154305.2-201ENSMUST00000225813 901 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 AC154683.1-201ENSMUST00000228409 1284 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb3O54879 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Hmgb3O54879 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Fam212b-201ENSMUST00000066610 4701 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Glp2r-201ENSMUST00000021289 1738 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 AC138284.4-201ENSMUST00000216704 2882 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Rexo5-202ENSMUST00000084644 2008 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Smoc1-202ENSMUST00000110347 3496 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb3O54879 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC8.25□□□□□ -1.09
Hmgb3O54879 Mia3-202ENSMUST00000109158 2961 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb3O54879 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Sez6l2-203ENSMUST00000106335 3732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Tars-201ENSMUST00000022849 4005 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Hmgb3O54879 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC8.25□□□□□ -1.09
Hmgb3O54879 Lrrc8d-202ENSMUST00000120847 3929 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Pcdhga7-202ENSMUST00000193476 3044 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Olfr320-202ENSMUST00000214662 3029 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Osbpl9-218ENSMUST00000162787 2408 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 4933416O17Rik-201ENSMUST00000220972 2122 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm14164-202ENSMUST00000128577 1999 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm42444-201ENSMUST00000199366 4558 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm12830-201ENSMUST00000137570 2306 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 AC158355.1-201ENSMUST00000215895 1705 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 AC123731.1-201ENSMUST00000227417 1403 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Chid1-201ENSMUST00000026586 3964 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Ccdc86-201ENSMUST00000025639 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm24346-201ENSMUST00000158712 194 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm17090-201ENSMUST00000171768 490 ntTSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm10731-201ENSMUST00000181171 448 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm2383-201ENSMUST00000181461 807 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm4895-201ENSMUST00000181646 1137 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm19353-201ENSMUST00000184561 445 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC8.24□□□□□ -1.09
Hmgb3O54879 Gm37141-201ENSMUST00000191938 422 ntBASIC8.24□□□□□ -1.09
Hmgb3O54879 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms