Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Nsdhl-201ENSMUST00000033715 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Inpp4b-212ENSMUST00000215332 5486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm44570-201ENSMUST00000207526 3698 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gdi2-201ENSMUST00000059515 2077 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Rufy4-201ENSMUST00000080167 2306 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Htr1a-201ENSMUST00000022235 4484 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Rgs6-201ENSMUST00000101234 1368 ntTSL 5 BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm10537-201ENSMUST00000192625 1698 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Sftpa1-202ENSMUST00000170719 2854 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Fbxo34-204ENSMUST00000165714 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm16299-201ENSMUST00000162724 2766 ntTSL 3 BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm25880-201ENSMUST00000104331 132 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm13204-201ENSMUST00000120110 821 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm28391-201ENSMUST00000185202 379 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm18443-201ENSMUST00000185358 556 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm29528-201ENSMUST00000186699 379 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm29526-201ENSMUST00000187217 379 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm45085-201ENSMUST00000209100 441 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm18670-201ENSMUST00000218712 696 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 AC133517.1-201ENSMUST00000225825 594 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gm25973-201ENSMUST00000083717 127 ntBASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Mospd1-201ENSMUST00000023836 1763 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Mospd1-202ENSMUST00000096447 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Cdc25b-201ENSMUST00000028804 3089 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Pcdhga5-201ENSMUST00000193414 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Lrrc14b-201ENSMUST00000022064 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trub1Q8C0D0 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Arhgap45-203ENSMUST00000105373 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Lrrcc1-202ENSMUST00000108370 3359 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Slc17a2-202ENSMUST00000099697 1893 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm17836-201ENSMUST00000191976 1302 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Lipa-201ENSMUST00000049572 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm44664-201ENSMUST00000206841 1786 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm25561-201ENSMUST00000104607 125 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Art2a-ps-201ENSMUST00000173420 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm7251-201ENSMUST00000182661 1009 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm6606-201ENSMUST00000193613 947 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm37921-201ENSMUST00000194333 695 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm35299-201ENSMUST00000195865 421 ntTSL 3 BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm5870-201ENSMUST00000196461 282 ntBASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 4933400L20Rik-202ENSMUST00000211119 870 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trub1Q8C0D0 Rint1-201ENSMUST00000030852 3298 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms