Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm45500-201ENSMUST00000211676 803 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 AC119177.2-201ENSMUST00000226699 629 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 CT030652.1-201ENSMUST00000227377 1235 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 AC142266.1-201ENSMUST00000228107 415 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm42714-201ENSMUST00000202063 1364 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Arhgap45-203ENSMUST00000105373 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Prrc1-201ENSMUST00000025490 4801 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Clrn1Q8K445 Gm10537-201ENSMUST00000192625 1698 ntBASIC9.58□□□□□ -0.88
Clrn1Q8K445 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Rnf111-202ENSMUST00000113595 4735 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Rnf111-207ENSMUST00000215848 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 1700110I01Rik-202ENSMUST00000112812 1737 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 Zfp61-201ENSMUST00000077780 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm24471-201ENSMUST00000104485 131 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm12106-201ENSMUST00000116006 1200 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm11502-201ENSMUST00000120917 1211 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm6238-201ENSMUST00000120999 465 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm15782-201ENSMUST00000121073 445 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm7516-201ENSMUST00000186198 706 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Ighv1-2-201ENSMUST00000195325 378 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm4880-201ENSMUST00000207645 1696 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 Chad-201ENSMUST00000040418 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm43412-201ENSMUST00000197455 2818 ntBASIC9.57□□□□□ -0.88
Clrn1Q8K445 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Lrrcc1-202ENSMUST00000108370 3359 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Clrn1Q8K445 Gm8873-201ENSMUST00000217847 1439 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Pcx-201ENSMUST00000068004 4148 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Rab11fip3-201ENSMUST00000118828 3271 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Kcne1-201ENSMUST00000051705 3155 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Mepe-201ENSMUST00000066207 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Clrn1Q8K445 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC9.56□□□□□ -0.88
Clrn1Q8K445 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC9.56□□□□□ -0.88
Clrn1Q8K445 Ptk2b-201ENSMUST00000022622 4034 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms