Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cd1d2-201ENSMUST00000041920 1243 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm9946-201ENSMUST00000008011 1025 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm7125-201ENSMUST00000093430 273 ntBASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm2897-201ENSMUST00000166494 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm3411-201ENSMUST00000170104 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Klf17-201ENSMUST00000062747 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm6225-201ENSMUST00000181558 1700 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trub1Q8C0D0 Gm45193-201ENSMUST00000204686 1552 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 4930511J24Rik-201ENSMUST00000223541 1528 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Mfsd2b-204ENSMUST00000137337 2641 ntTSL 2 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Dido1-205ENSMUST00000103056 4281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 AC123731.1-201ENSMUST00000227417 1403 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Pdk4-201ENSMUST00000019721 3484 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gm44510-201ENSMUST00000206288 4532 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Mgat4a-202ENSMUST00000143636 1802 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gm14705-201ENSMUST00000154109 1824 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Ighv6-3-201ENSMUST00000103486 356 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gm14853-201ENSMUST00000116081 549 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gm13600-201ENSMUST00000117949 744 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gm12712-201ENSMUST00000120676 801 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Lsm6-204ENSMUST00000146824 541 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gm20493-201ENSMUST00000173706 213 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gm18801-201ENSMUST00000186616 536 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 AC157931.1-201ENSMUST00000198565 346 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 4931431B13Rik-202ENSMUST00000205646 473 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Gm9791-201ENSMUST00000060997 447 ntBASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Grxcr2-201ENSMUST00000097591 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trub1Q8C0D0 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Arhgap26-216ENSMUST00000155576 2280 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Prune2-202ENSMUST00000223920 1803 ntBASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Smim7-203ENSMUST00000167290 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm6238-201ENSMUST00000120999 465 ntBASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm26356-201ENSMUST00000158217 283 ntBASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm2316-201ENSMUST00000190613 921 ntBASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm30873-201ENSMUST00000207512 1222 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm2253-201ENSMUST00000211775 414 ntBASIC10.42□□□□□ -0.74
Trub1Q8C0D0 CT025551.1-201ENSMUST00000223996 692 ntBASIC10.42□□□□□ -0.74
Trub1Q8C0D0 1700063H04Rik-201ENSMUST00000043553 817 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm4883-201ENSMUST00000085702 528 ntBASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Celf2-211ENSMUST00000142941 2338 ntTSL 5 BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trub1Q8C0D0 Gm28988-201ENSMUST00000191363 1897 ntTSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms