Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm13120-201ENSMUST00000117343 1446 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm12035-201ENSMUST00000121890 623 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm25569-201ENSMUST00000157175 131 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm23081-201ENSMUST00000157845 297 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm17214-201ENSMUST00000164501 541 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm28671-201ENSMUST00000187036 692 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm7539-201ENSMUST00000189789 630 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm45500-201ENSMUST00000211676 803 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 AC117648.1-201ENSMUST00000219777 2510 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gm18363-201ENSMUST00000221671 730 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Slc9b2-201ENSMUST00000051849 4818 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Btrc-206ENSMUST00000224102 3037 ntBASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Sec61a2Q9JLR1 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Ppip5k1-203ENSMUST00000110626 5171 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Cspp1-201ENSMUST00000071087 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Gm1826-201ENSMUST00000118646 1162 ntBASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Gm13981-201ENSMUST00000122360 447 ntBASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Gm16033-201ENSMUST00000144915 596 ntTSL 5 BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Gm16167-201ENSMUST00000160428 1065 ntBASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Gm25677-201ENSMUST00000174983 72 ntBASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Mir6387-201ENSMUST00000184042 108 ntBASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Gm29543-201ENSMUST00000188138 967 ntBASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Sec61a2Q9JLR1 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms