Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm42633-201ENSMUST00000198853 2764 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 4930429F24Rik-201ENSMUST00000151676 1520 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm7052-201ENSMUST00000167568 1512 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Adam17-201ENSMUST00000064536 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Lrtm1-203ENSMUST00000224760 3060 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 Ptgs2os2-201ENSMUST00000181308 1745 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 AC104200.1-201ENSMUST00000224527 1746 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm8446-201ENSMUST00000188834 2712 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm12165-201ENSMUST00000117047 342 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm5944-201ENSMUST00000118182 1001 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm16033-201ENSMUST00000144915 596 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm9369-201ENSMUST00000196009 733 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm42710-201ENSMUST00000200608 985 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm43811-201ENSMUST00000202862 695 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 1700012J15Rik-201ENSMUST00000203458 471 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 AC164618.2-201ENSMUST00000224770 573 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 CT030182.1-201ENSMUST00000225935 533 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm5879-201ENSMUST00000089501 1209 ntBASIC8.3□□□□□ -1.08
Hmgb3O54879 Smoc1-203ENSMUST00000129362 3385 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Nrip3-202ENSMUST00000041460 3927 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Mtmr4-202ENSMUST00000103179 5753 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Nbr1-201ENSMUST00000071537 3239 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Nedd4l-201ENSMUST00000080418 3326 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Zbtb37-205ENSMUST00000171748 2141 ntTSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm16299-201ENSMUST00000162724 2766 ntTSL 3 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Olfr1221-203ENSMUST00000213404 2778 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Hmgb3O54879 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Hmgb3O54879 Gm6655-201ENSMUST00000201932 1309 ntBASIC8.29□□□□□ -1.08
Hmgb3O54879 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Gm43795-201ENSMUST00000202051 2366 ntBASIC8.29□□□□□ -1.08
Hmgb3O54879 Aar2-201ENSMUST00000029158 3427 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 AC110091.2-201ENSMUST00000215107 1512 ntTSL 5 BASIC8.29□□□□□ -1.08
Hmgb3O54879 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Hmgb3O54879 Gm7353-201ENSMUST00000069044 2866 ntBASIC8.29□□□□□ -1.08
Hmgb3O54879 Wfs1-202ENSMUST00000166339 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Arpp19-209ENSMUST00000169492 3963 ntTSL 2 BASIC8.29□□□□□ -1.08
Hmgb3O54879 Lpin2-204ENSMUST00000129635 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Crx-201ENSMUST00000044434 2919 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Hmgb3O54879 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Hmgb3O54879 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Snord23-201ENSMUST00000116828 109 ntBASIC8.29□□□□□ -1.08
Hmgb3O54879 Ak3l2-ps-201ENSMUST00000120282 672 ntBASIC8.29□□□□□ -1.08
Hmgb3O54879 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC8.29□□□□□ -1.08
Hmgb3O54879 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC8.29□□□□□ -1.08
Hmgb3O54879 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC8.29□□□□□ -1.08
Hmgb3O54879 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC8.29□□□□□ -1.08
Hmgb3O54879 Gm7696-201ENSMUST00000174727 907 ntBASIC8.29□□□□□ -1.08
Hmgb3O54879 Gm21092-201ENSMUST00000178995 955 ntBASIC8.29□□□□□ -1.08
Hmgb3O54879 Ap1g1-206ENSMUST00000179104 1096 ntBASIC8.29□□□□□ -1.08
Hmgb3O54879 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC8.29□□□□□ -1.08
Hmgb3O54879 Gm19015-201ENSMUST00000184002 1189 ntBASIC8.29□□□□□ -1.08
Hmgb3O54879 Gm8022-201ENSMUST00000191763 904 ntBASIC8.29□□□□□ -1.08
Hmgb3O54879 Gm37350-201ENSMUST00000192782 313 ntTSL 5 BASIC8.29□□□□□ -1.08
Hmgb3O54879 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC8.29□□□□□ -1.08
Hmgb3O54879 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Hmgb3O54879 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms