Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Cntrl-202ENSMUST00000028237 7615 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 AC158779.1-201ENSMUST00000228912 3861 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm11736-201ENSMUST00000121468 505 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm12453-201ENSMUST00000121981 331 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm16574-201ENSMUST00000159301 745 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm7572-201ENSMUST00000182616 766 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm8502-201ENSMUST00000185708 901 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm21147-201ENSMUST00000186046 913 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm8510-201ENSMUST00000189202 895 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm2316-201ENSMUST00000190613 921 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Gm7939-201ENSMUST00000201233 1050 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 BC080696-201ENSMUST00000202858 1218 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 CT010431.1-201ENSMUST00000221249 1080 ntBASIC9.61□□□□□ -0.87
Clrn1Q8K445 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Hdac7-207ENSMUST00000120683 3701 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 4930429F24Rik-201ENSMUST00000151676 1520 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Cpm-201ENSMUST00000020399 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Clrn1Q8K445 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Smg7-202ENSMUST00000073441 5767 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm12645-201ENSMUST00000117297 275 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm11771-201ENSMUST00000118124 732 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm11340-201ENSMUST00000119226 412 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm20414-201ENSMUST00000172918 646 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm25872-201ENSMUST00000177784 100 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm20821-202ENSMUST00000180352 684 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm6773-201ENSMUST00000182377 878 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm5254-201ENSMUST00000188353 977 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm6606-201ENSMUST00000193613 947 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm18894-201ENSMUST00000198794 694 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm43452-201ENSMUST00000201873 991 ntBASIC9.6□□□□□ -0.87
Clrn1Q8K445 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms