Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Isx-201ENSMUST00000034034 1793 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Tbce-201ENSMUST00000039894 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Catsperd-201ENSMUST00000112979 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Rab11fip3-201ENSMUST00000118828 3271 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm22751-201ENSMUST00000102077 109 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Mir692-3-201ENSMUST00000102079 109 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Mir692-2-201ENSMUST00000102081 109 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm15258-201ENSMUST00000153801 741 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm18201-201ENSMUST00000174735 875 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm25872-201ENSMUST00000177784 100 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm3534-201ENSMUST00000182522 1001 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm6967-201ENSMUST00000182599 1007 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm17815-201ENSMUST00000198305 895 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm44388-201ENSMUST00000204350 258 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm25517-201ENSMUST00000083865 134 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Ptgs2os2-201ENSMUST00000181308 1745 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trub1Q8C0D0 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Blnk-202ENSMUST00000117695 1701 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Poteg-201ENSMUST00000081321 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gm13197-201ENSMUST00000117204 225 ntBASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Ptgds-201ENSMUST00000015234 901 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gm20414-201ENSMUST00000172918 646 ntBASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gm22662-201ENSMUST00000175290 256 ntBASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gm9771-201ENSMUST00000198267 1137 ntBASIC10.48□□□□□ -0.73
Trub1Q8C0D0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 4930533K18Rik-201ENSMUST00000058942 1259 ntTSL 5 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Gm8991-201ENSMUST00000073014 1075 ntBASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trub1Q8C0D0 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms