Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.74■□□□□ 0.75
H2afb2S4R1M3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
H2afb2S4R1M3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.73■□□□□ 0.75
H2afb2S4R1M3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
H2afb2S4R1M3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afb2S4R1M3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H2afb2S4R1M3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afb2S4R1M3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afb2S4R1M3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
H2afb2S4R1M3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.72■□□□□ 0.75
H2afb2S4R1M3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb2S4R1M3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb2S4R1M3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb2S4R1M3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb2S4R1M3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.7■□□□□ 0.74
H2afb2S4R1M3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb2S4R1M3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb2S4R1M3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.7■□□□□ 0.74
H2afb2S4R1M3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
H2afb2S4R1M3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb2S4R1M3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb2S4R1M3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb2S4R1M3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb2S4R1M3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb2S4R1M3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb2S4R1M3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb2S4R1M3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb2S4R1M3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb2S4R1M3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb2S4R1M3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb2S4R1M3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb2S4R1M3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
H2afb2S4R1M3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb2S4R1M3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb2S4R1M3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb2S4R1M3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb2S4R1M3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb2S4R1M3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb2S4R1M3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb2S4R1M3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms