Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube4bQ9ES00 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4bQ9ES00 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4bQ9ES00 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4bQ9ES00 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4bQ9ES00 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4bQ9ES00 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4bQ9ES00 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4bQ9ES00 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4bQ9ES00 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube4bQ9ES00 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Gm12366-201ENSMUST00000121722 873 ntBASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Gm5786-201ENSMUST00000085368 882 ntBASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ube4bQ9ES00 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.86■□□□□ 0.61
Ube4bQ9ES00 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ube4bQ9ES00 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4bQ9ES00 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4bQ9ES00 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4bQ9ES00 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4bQ9ES00 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4bQ9ES00 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4bQ9ES00 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4bQ9ES00 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.84■□□□□ 0.61
Ube4bQ9ES00 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.84■□□□□ 0.61
Ube4bQ9ES00 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4bQ9ES00 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4bQ9ES00 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ube4bQ9ES00 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4bQ9ES00 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ube4bQ9ES00 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ube4bQ9ES00 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ube4bQ9ES00 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
Ube4bQ9ES00 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ube4bQ9ES00 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4bQ9ES00 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4bQ9ES00 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4bQ9ES00 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4bQ9ES00 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ube4bQ9ES00 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Ube4bQ9ES00 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.83■□□□□ 0.6
Ube4bQ9ES00 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4bQ9ES00 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4bQ9ES00 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4bQ9ES00 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4bQ9ES00 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.81■□□□□ 0.6
Ube4bQ9ES00 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4bQ9ES00 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4bQ9ES00 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4bQ9ES00 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4bQ9ES00 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4bQ9ES00 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4bQ9ES00 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4bQ9ES00 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4bQ9ES00 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4bQ9ES00 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4bQ9ES00 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ube4bQ9ES00 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube4bQ9ES00 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube4bQ9ES00 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube4bQ9ES00 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube4bQ9ES00 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms