Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps33aQ9D2N9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps33aQ9D2N9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps33aQ9D2N9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps33aQ9D2N9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps33aQ9D2N9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps33aQ9D2N9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps33aQ9D2N9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Vps33aQ9D2N9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps33aQ9D2N9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Vps33aQ9D2N9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps33aQ9D2N9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps33aQ9D2N9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vps33aQ9D2N9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Vps33aQ9D2N9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Vps33aQ9D2N9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps33aQ9D2N9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vps33aQ9D2N9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps33aQ9D2N9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Vps33aQ9D2N9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps33aQ9D2N9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vps33aQ9D2N9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps33aQ9D2N9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Vps33aQ9D2N9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps33aQ9D2N9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps33aQ9D2N9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps33aQ9D2N9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps33aQ9D2N9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vps33aQ9D2N9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps33aQ9D2N9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps33aQ9D2N9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.92■□□□□ 0.94
Vps33aQ9D2N9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Vps33aQ9D2N9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps33aQ9D2N9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Vps33aQ9D2N9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Vps33aQ9D2N9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps33aQ9D2N9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Vps33aQ9D2N9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps33aQ9D2N9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps33aQ9D2N9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Vps33aQ9D2N9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps33aQ9D2N9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps33aQ9D2N9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps33aQ9D2N9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps33aQ9D2N9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps33aQ9D2N9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.89■□□□□ 0.94
Vps33aQ9D2N9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.89■□□□□ 0.94
Vps33aQ9D2N9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Vps33aQ9D2N9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vps33aQ9D2N9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Vps33aQ9D2N9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vps33aQ9D2N9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vps33aQ9D2N9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.89■□□□□ 0.93
Vps33aQ9D2N9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.89■□□□□ 0.93
Vps33aQ9D2N9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.89■□□□□ 0.93
Vps33aQ9D2N9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps33aQ9D2N9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Vps33aQ9D2N9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
Vps33aQ9D2N9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vps33aQ9D2N9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Vps33aQ9D2N9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Gm9806-201ENSMUST00000051080 552 ntBASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps33aQ9D2N9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.87■□□□□ 0.93
Vps33aQ9D2N9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.87■□□□□ 0.93
Vps33aQ9D2N9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps33aQ9D2N9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps33aQ9D2N9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vps33aQ9D2N9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps33aQ9D2N9 Scarna2-201ENSMUST00000157560 414 ntBASIC20.87■□□□□ 0.93
Vps33aQ9D2N9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.87■□□□□ 0.93
Vps33aQ9D2N9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps33aQ9D2N9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33aQ9D2N9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33aQ9D2N9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33aQ9D2N9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.86■□□□□ 0.93
Vps33aQ9D2N9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps33aQ9D2N9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms