Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ssu72Q9CY97 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssu72Q9CY97 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Gm43566-201ENSMUST00000196851 808 ntBASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ssu72Q9CY97 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.6■□□□□ 0.73
Ssu72Q9CY97 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssu72Q9CY97 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ssu72Q9CY97 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssu72Q9CY97 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssu72Q9CY97 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ssu72Q9CY97 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.59■□□□□ 0.73
Ssu72Q9CY97 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssu72Q9CY97 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssu72Q9CY97 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ssu72Q9CY97 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssu72Q9CY97 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssu72Q9CY97 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssu72Q9CY97 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Ssu72Q9CY97 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssu72Q9CY97 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ssu72Q9CY97 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssu72Q9CY97 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ssu72Q9CY97 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.58■□□□□ 0.72
Ssu72Q9CY97 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssu72Q9CY97 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssu72Q9CY97 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
Ssu72Q9CY97 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssu72Q9CY97 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssu72Q9CY97 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Gm13238-201ENSMUST00000117655 780 ntBASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssu72Q9CY97 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssu72Q9CY97 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms