Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh4Q99MT2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh4Q99MT2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Msh4Q99MT2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh4Q99MT2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.16■□□□□ 0.66
Msh4Q99MT2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh4Q99MT2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Msh4Q99MT2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Msh4Q99MT2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.16■□□□□ 0.66
Msh4Q99MT2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Msh4Q99MT2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Msh4Q99MT2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh4Q99MT2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Gm43530-201ENSMUST00000195920 274 ntBASIC19.15■□□□□ 0.66
Msh4Q99MT2 Gm45417-201ENSMUST00000209533 758 ntBASIC19.15■□□□□ 0.66
Msh4Q99MT2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh4Q99MT2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.15■□□□□ 0.66
Msh4Q99MT2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Msh4Q99MT2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Msh4Q99MT2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh4Q99MT2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh4Q99MT2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msh4Q99MT2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh4Q99MT2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msh4Q99MT2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh4Q99MT2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh4Q99MT2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Msh4Q99MT2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh4Q99MT2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh4Q99MT2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Msh4Q99MT2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Msh4Q99MT2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Msh4Q99MT2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Msh4Q99MT2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh4Q99MT2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh4Q99MT2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Msh4Q99MT2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh4Q99MT2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh4Q99MT2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Msh4Q99MT2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh4Q99MT2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Msh4Q99MT2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Msh4Q99MT2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Msh4Q99MT2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh4Q99MT2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.12■□□□□ 0.65
Msh4Q99MT2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.12■□□□□ 0.65
Msh4Q99MT2 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.12■□□□□ 0.65
Msh4Q99MT2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.12■□□□□ 0.65
Msh4Q99MT2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Msh4Q99MT2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh4Q99MT2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Msh4Q99MT2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh4Q99MT2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh4Q99MT2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh4Q99MT2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Msh4Q99MT2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.11■□□□□ 0.65
Msh4Q99MT2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh4Q99MT2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh4Q99MT2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh4Q99MT2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Msh4Q99MT2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh4Q99MT2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.1■□□□□ 0.65
Msh4Q99MT2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.1■□□□□ 0.65
Msh4Q99MT2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh4Q99MT2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Msh4Q99MT2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Msh4Q99MT2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Gm43137-201ENSMUST00000198052 594 ntBASIC19.09■□□□□ 0.65
Msh4Q99MT2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Msh4Q99MT2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Msh4Q99MT2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Msh4Q99MT2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.08■□□□□ 0.64
Msh4Q99MT2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh4Q99MT2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms