Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcc1Q99LI2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.52■□□□□ 0.72
Clcc1Q99LI2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Clcc1Q99LI2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.52■□□□□ 0.72
Clcc1Q99LI2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clcc1Q99LI2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Clcc1Q99LI2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Clcc1Q99LI2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Clcc1Q99LI2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcc1Q99LI2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.51■□□□□ 0.71
Clcc1Q99LI2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcc1Q99LI2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Clcc1Q99LI2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.51■□□□□ 0.71
Clcc1Q99LI2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcc1Q99LI2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clcc1Q99LI2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clcc1Q99LI2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Gm10493-201ENSMUST00000097270 612 ntBASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clcc1Q99LI2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clcc1Q99LI2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Clcc1Q99LI2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.48■□□□□ 0.71
Clcc1Q99LI2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clcc1Q99LI2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.48■□□□□ 0.71
Clcc1Q99LI2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcc1Q99LI2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clcc1Q99LI2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcc1Q99LI2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcc1Q99LI2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clcc1Q99LI2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clcc1Q99LI2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.47■□□□□ 0.71
Clcc1Q99LI2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcc1Q99LI2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.47■□□□□ 0.71
Clcc1Q99LI2 Gm26571-201ENSMUST00000181399 666 ntBASIC19.47■□□□□ 0.71
Clcc1Q99LI2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.47■□□□□ 0.71
Clcc1Q99LI2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcc1Q99LI2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcc1Q99LI2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clcc1Q99LI2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcc1Q99LI2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clcc1Q99LI2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcc1Q99LI2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcc1Q99LI2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clcc1Q99LI2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Clcc1Q99LI2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcc1Q99LI2 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.46■□□□□ 0.71
Clcc1Q99LI2 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.46■□□□□ 0.71
Clcc1Q99LI2 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.46■□□□□ 0.71
Clcc1Q99LI2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcc1Q99LI2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcc1Q99LI2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Clcc1Q99LI2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcc1Q99LI2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Gm11421-201ENSMUST00000122124 294 ntBASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Gm29257-201ENSMUST00000186115 639 ntBASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcc1Q99LI2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcc1Q99LI2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Clcc1Q99LI2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Clcc1Q99LI2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.44■□□□□ 0.7
Clcc1Q99LI2 Gm42569-201ENSMUST00000200539 472 ntBASIC19.44■□□□□ 0.7
Clcc1Q99LI2 Gm42642-201ENSMUST00000200683 355 ntBASIC19.44■□□□□ 0.7
Clcc1Q99LI2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.44■□□□□ 0.7
Clcc1Q99LI2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clcc1Q99LI2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms