Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Prdm9Q96EQ9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prdm9Q96EQ9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prdm9Q96EQ9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prdm9Q96EQ9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prdm9Q96EQ9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prdm9Q96EQ9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Prdm9Q96EQ9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prdm9Q96EQ9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prdm9Q96EQ9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prdm9Q96EQ9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prdm9Q96EQ9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prdm9Q96EQ9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.45■□□□□ 0.7
Prdm9Q96EQ9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.45■□□□□ 0.7
Prdm9Q96EQ9 Gm5874-201ENSMUST00000096101 508 ntBASIC19.45■□□□□ 0.7
Prdm9Q96EQ9 Gm10493-201ENSMUST00000097270 612 ntBASIC19.45■□□□□ 0.7
Prdm9Q96EQ9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prdm9Q96EQ9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prdm9Q96EQ9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prdm9Q96EQ9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prdm9Q96EQ9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm9Q96EQ9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm9Q96EQ9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm9Q96EQ9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.43■□□□□ 0.7
Prdm9Q96EQ9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.43■□□□□ 0.7
Prdm9Q96EQ9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm9Q96EQ9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm9Q96EQ9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm9Q96EQ9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prdm9Q96EQ9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Prdm9Q96EQ9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.43■□□□□ 0.7
Prdm9Q96EQ9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prdm9Q96EQ9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prdm9Q96EQ9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm9Q96EQ9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm9Q96EQ9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
Prdm9Q96EQ9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.39■□□□□ 0.69
Prdm9Q96EQ9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Prdm9Q96EQ9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.39■□□□□ 0.69
Prdm9Q96EQ9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm9Q96EQ9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Prdm9Q96EQ9 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.39■□□□□ 0.69
Prdm9Q96EQ9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm9Q96EQ9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm9Q96EQ9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm9Q96EQ9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm9Q96EQ9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm9Q96EQ9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm9Q96EQ9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm9Q96EQ9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms