Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb6Q91XZ4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb6Q91XZ4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb6Q91XZ4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb6Q91XZ4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb6Q91XZ4 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.29■□□□□ 0.84
Pcdhb6Q91XZ4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhb6Q91XZ4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb6Q91XZ4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb6Q91XZ4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
Pcdhb6Q91XZ4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb6Q91XZ4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.29■□□□□ 0.84
Pcdhb6Q91XZ4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb6Q91XZ4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb6Q91XZ4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhb6Q91XZ4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb6Q91XZ4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb6Q91XZ4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pcdhb6Q91XZ4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb6Q91XZ4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhb6Q91XZ4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb6Q91XZ4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Pcdhb6Q91XZ4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb6Q91XZ4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb6Q91XZ4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb6Q91XZ4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb6Q91XZ4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb6Q91XZ4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb6Q91XZ4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb6Q91XZ4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhb6Q91XZ4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb6Q91XZ4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb6Q91XZ4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb6Q91XZ4 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.27■□□□□ 0.83
Pcdhb6Q91XZ4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb6Q91XZ4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Pcdhb6Q91XZ4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb6Q91XZ4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb6Q91XZ4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb6Q91XZ4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb6Q91XZ4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb6Q91XZ4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb6Q91XZ4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb6Q91XZ4 AA386476-201ENSMUST00000098781 1665 ntBASIC20.26■□□□□ 0.83
Pcdhb6Q91XZ4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb6Q91XZ4 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.25■□□□□ 0.83
Pcdhb6Q91XZ4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb6Q91XZ4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb6Q91XZ4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdhb6Q91XZ4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb6Q91XZ4 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.25■□□□□ 0.83
Pcdhb6Q91XZ4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb6Q91XZ4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb6Q91XZ4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb6Q91XZ4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb6Q91XZ4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb6Q91XZ4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb6Q91XZ4 Gm43137-201ENSMUST00000198052 594 ntBASIC20.24■□□□□ 0.83
Pcdhb6Q91XZ4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Pcdhb6Q91XZ4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb6Q91XZ4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb6Q91XZ4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb6Q91XZ4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhb6Q91XZ4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb6Q91XZ4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb6Q91XZ4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb6Q91XZ4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb6Q91XZ4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb6Q91XZ4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb6Q91XZ4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb6Q91XZ4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb6Q91XZ4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb6Q91XZ4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms