Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
H1fooQ8VIK3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
H1fooQ8VIK3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.47■□□□□ 0.23
H1fooQ8VIK3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H1fooQ8VIK3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H1fooQ8VIK3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H1fooQ8VIK3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H1fooQ8VIK3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.46■□□□□ 0.23
H1fooQ8VIK3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H1fooQ8VIK3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
H1fooQ8VIK3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
H1fooQ8VIK3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H1fooQ8VIK3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
H1fooQ8VIK3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
H1fooQ8VIK3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
H1fooQ8VIK3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.45■□□□□ 0.22
H1fooQ8VIK3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H1fooQ8VIK3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H1fooQ8VIK3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
H1fooQ8VIK3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
H1fooQ8VIK3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H1fooQ8VIK3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H1fooQ8VIK3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
H1fooQ8VIK3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
H1fooQ8VIK3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
H1fooQ8VIK3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.42■□□□□ 0.22
H1fooQ8VIK3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms