Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rprd1aQ8VDS4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Rprd1aQ8VDS4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rprd1aQ8VDS4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rprd1aQ8VDS4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rprd1aQ8VDS4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rprd1aQ8VDS4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rprd1aQ8VDS4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rprd1aQ8VDS4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rprd1aQ8VDS4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.27■□□□□ 0.84
Rprd1aQ8VDS4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rprd1aQ8VDS4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rprd1aQ8VDS4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rprd1aQ8VDS4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Rprd1aQ8VDS4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rprd1aQ8VDS4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.24■□□□□ 0.83
Rprd1aQ8VDS4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rprd1aQ8VDS4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rprd1aQ8VDS4 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.22■□□□□ 0.83
Rprd1aQ8VDS4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.22■□□□□ 0.83
Rprd1aQ8VDS4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rprd1aQ8VDS4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rprd1aQ8VDS4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rprd1aQ8VDS4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rprd1aQ8VDS4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rprd1aQ8VDS4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rprd1aQ8VDS4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.21■□□□□ 0.83
Rprd1aQ8VDS4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rprd1aQ8VDS4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rprd1aQ8VDS4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.21■□□□□ 0.83
Rprd1aQ8VDS4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.21■□□□□ 0.83
Rprd1aQ8VDS4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.2■□□□□ 0.82
Rprd1aQ8VDS4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Rprd1aQ8VDS4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rprd1aQ8VDS4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Rprd1aQ8VDS4 Gm26833-201ENSMUST00000180899 440 ntBASIC20.2■□□□□ 0.82
Rprd1aQ8VDS4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.2■□□□□ 0.82
Rprd1aQ8VDS4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rprd1aQ8VDS4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rprd1aQ8VDS4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rprd1aQ8VDS4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms