Protein–RNA interactions for Protein: Q8R3B7

Brd8, Bromodomain-containing protein 8, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd8Q8R3B7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Smad6-203ENSMUST00000179458 273 ntBASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Gm43017-201ENSMUST00000198296 752 ntBASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Serp2-204ENSMUST00000228055 705 ntBASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Brd8Q8R3B7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Brd8Q8R3B7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.14■□□□□ 0.82
Brd8Q8R3B7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Brd8Q8R3B7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Brd8Q8R3B7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Brd8Q8R3B7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Brd8Q8R3B7 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.14■□□□□ 0.81
Brd8Q8R3B7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.14■□□□□ 0.81
Brd8Q8R3B7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brd8Q8R3B7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Brd8Q8R3B7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Brd8Q8R3B7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brd8Q8R3B7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Brd8Q8R3B7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brd8Q8R3B7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brd8Q8R3B7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Brd8Q8R3B7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Gm26833-201ENSMUST00000180899 440 ntBASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Brd8Q8R3B7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brd8Q8R3B7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brd8Q8R3B7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brd8Q8R3B7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.11■□□□□ 0.81
Brd8Q8R3B7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brd8Q8R3B7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brd8Q8R3B7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Brd8Q8R3B7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Brd8Q8R3B7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brd8Q8R3B7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Brd8Q8R3B7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.09■□□□□ 0.81
Brd8Q8R3B7 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.09■□□□□ 0.81
Brd8Q8R3B7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Brd8Q8R3B7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Brd8Q8R3B7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Brd8Q8R3B7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Brd8Q8R3B7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Brd8Q8R3B7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Brd8Q8R3B7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Brd8Q8R3B7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.08■□□□□ 0.81
Brd8Q8R3B7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.08■□□□□ 0.8
Brd8Q8R3B7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Brd8Q8R3B7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Brd8Q8R3B7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Brd8Q8R3B7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.07■□□□□ 0.8
Brd8Q8R3B7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.07■□□□□ 0.8
Brd8Q8R3B7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Brd8Q8R3B7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Brd8Q8R3B7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brd8Q8R3B7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Brd8Q8R3B7 Gm11421-201ENSMUST00000122124 294 ntBASIC20.06■□□□□ 0.8
Brd8Q8R3B7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Brd8Q8R3B7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Brd8Q8R3B7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 149.2 ms