Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Zc3h3Q8CHP0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Zc3h3Q8CHP0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Zc3h3Q8CHP0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zc3h3Q8CHP0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Zc3h3Q8CHP0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zc3h3Q8CHP0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zc3h3Q8CHP0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Zc3h3Q8CHP0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zc3h3Q8CHP0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zc3h3Q8CHP0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zc3h3Q8CHP0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Zc3h3Q8CHP0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Zc3h3Q8CHP0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Zc3h3Q8CHP0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.52■□□□□ 0.72
Zc3h3Q8CHP0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Zc3h3Q8CHP0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Zc3h3Q8CHP0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Zc3h3Q8CHP0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Zc3h3Q8CHP0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Zc3h3Q8CHP0 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.51■□□□□ 0.71
Zc3h3Q8CHP0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zc3h3Q8CHP0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zc3h3Q8CHP0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zc3h3Q8CHP0 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.5■□□□□ 0.71
Zc3h3Q8CHP0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Zc3h3Q8CHP0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Zc3h3Q8CHP0 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.5■□□□□ 0.71
Zc3h3Q8CHP0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zc3h3Q8CHP0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zc3h3Q8CHP0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zc3h3Q8CHP0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Gm38205-201ENSMUST00000192243 258 ntBASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zc3h3Q8CHP0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Zc3h3Q8CHP0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.48■□□□□ 0.71
Zc3h3Q8CHP0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Zc3h3Q8CHP0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Zc3h3Q8CHP0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Zc3h3Q8CHP0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Zc3h3Q8CHP0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zc3h3Q8CHP0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.47■□□□□ 0.71
Zc3h3Q8CHP0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Zc3h3Q8CHP0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Zc3h3Q8CHP0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Zc3h3Q8CHP0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Zc3h3Q8CHP0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Zc3h3Q8CHP0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Zc3h3Q8CHP0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Zc3h3Q8CHP0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zc3h3Q8CHP0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zc3h3Q8CHP0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.45■□□□□ 0.7
Zc3h3Q8CHP0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zc3h3Q8CHP0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zc3h3Q8CHP0 Gm27275-201ENSMUST00000184318 272 ntBASIC19.45■□□□□ 0.7
Zc3h3Q8CHP0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Zc3h3Q8CHP0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zc3h3Q8CHP0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zc3h3Q8CHP0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Zc3h3Q8CHP0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Zc3h3Q8CHP0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zc3h3Q8CHP0 Gm715-201ENSMUST00000117865 831 ntBASIC19.44■□□□□ 0.7
Zc3h3Q8CHP0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Zc3h3Q8CHP0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Zc3h3Q8CHP0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.44■□□□□ 0.7
Zc3h3Q8CHP0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Zc3h3Q8CHP0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.43■□□□□ 0.7
Zc3h3Q8CHP0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zc3h3Q8CHP0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Zc3h3Q8CHP0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Zc3h3Q8CHP0 Gm13534-201ENSMUST00000121169 513 ntBASIC19.43■□□□□ 0.7
Zc3h3Q8CHP0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.43■□□□□ 0.7
Zc3h3Q8CHP0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Zc3h3Q8CHP0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms