Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Vcpip1Q8CDG3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vcpip1Q8CDG3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Vcpip1Q8CDG3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vcpip1Q8CDG3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vcpip1Q8CDG3 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.18■□□□□ 0.98
Vcpip1Q8CDG3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vcpip1Q8CDG3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vcpip1Q8CDG3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
Vcpip1Q8CDG3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vcpip1Q8CDG3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vcpip1Q8CDG3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vcpip1Q8CDG3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vcpip1Q8CDG3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vcpip1Q8CDG3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vcpip1Q8CDG3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Vcpip1Q8CDG3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vcpip1Q8CDG3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Vcpip1Q8CDG3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vcpip1Q8CDG3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.15■□□□□ 0.98
Vcpip1Q8CDG3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vcpip1Q8CDG3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vcpip1Q8CDG3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.15■□□□□ 0.98
Vcpip1Q8CDG3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Vcpip1Q8CDG3 Gm22238-201ENSMUST00000175222 88 ntBASIC21.15■□□□□ 0.98
Vcpip1Q8CDG3 Serp2-204ENSMUST00000228055 705 ntBASIC21.15■□□□□ 0.98
Vcpip1Q8CDG3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Vcpip1Q8CDG3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vcpip1Q8CDG3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.14■□□□□ 0.97
Vcpip1Q8CDG3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.14■□□□□ 0.97
Vcpip1Q8CDG3 Gm13241-201ENSMUST00000094493 780 ntBASIC21.14■□□□□ 0.97
Vcpip1Q8CDG3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vcpip1Q8CDG3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vcpip1Q8CDG3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vcpip1Q8CDG3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vcpip1Q8CDG3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vcpip1Q8CDG3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 Mir6236-201ENSMUST00000184437 123 ntBASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vcpip1Q8CDG3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vcpip1Q8CDG3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vcpip1Q8CDG3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vcpip1Q8CDG3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vcpip1Q8CDG3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.12■□□□□ 0.97
Vcpip1Q8CDG3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vcpip1Q8CDG3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vcpip1Q8CDG3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vcpip1Q8CDG3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.12■□□□□ 0.97
Vcpip1Q8CDG3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vcpip1Q8CDG3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vcpip1Q8CDG3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vcpip1Q8CDG3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcpip1Q8CDG3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.11■□□□□ 0.97
Vcpip1Q8CDG3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcpip1Q8CDG3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Vcpip1Q8CDG3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcpip1Q8CDG3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vcpip1Q8CDG3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vcpip1Q8CDG3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vcpip1Q8CDG3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vcpip1Q8CDG3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 229.4 ms