Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3rf3Q8C120 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3rf3Q8C120 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3rf3Q8C120 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sh3rf3Q8C120 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3rf3Q8C120 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Sh3rf3Q8C120 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3rf3Q8C120 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3rf3Q8C120 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3rf3Q8C120 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Sh3rf3Q8C120 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sh3rf3Q8C120 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.54■□□□□ 0.88
Sh3rf3Q8C120 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3rf3Q8C120 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.54■□□□□ 0.88
Sh3rf3Q8C120 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sh3rf3Q8C120 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3rf3Q8C120 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Sh3rf3Q8C120 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3rf3Q8C120 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3rf3Q8C120 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3rf3Q8C120 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3rf3Q8C120 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3rf3Q8C120 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3rf3Q8C120 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sh3rf3Q8C120 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3rf3Q8C120 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3rf3Q8C120 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3rf3Q8C120 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.52■□□□□ 0.88
Sh3rf3Q8C120 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.52■□□□□ 0.88
Sh3rf3Q8C120 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.52■□□□□ 0.88
Sh3rf3Q8C120 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3rf3Q8C120 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.52■□□□□ 0.88
Sh3rf3Q8C120 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3rf3Q8C120 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sh3rf3Q8C120 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.52■□□□□ 0.87
Sh3rf3Q8C120 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Sh3rf3Q8C120 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3rf3Q8C120 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.51■□□□□ 0.87
Sh3rf3Q8C120 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Sh3rf3Q8C120 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.51■□□□□ 0.87
Sh3rf3Q8C120 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3rf3Q8C120 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3rf3Q8C120 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3rf3Q8C120 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3rf3Q8C120 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.51■□□□□ 0.87
Sh3rf3Q8C120 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3rf3Q8C120 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sh3rf3Q8C120 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3rf3Q8C120 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3rf3Q8C120 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3rf3Q8C120 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sh3rf3Q8C120 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3rf3Q8C120 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.5■□□□□ 0.87
Sh3rf3Q8C120 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3rf3Q8C120 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3rf3Q8C120 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf3Q8C120 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Sh3rf3Q8C120 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf3Q8C120 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf3Q8C120 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf3Q8C120 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf3Q8C120 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.48■□□□□ 0.87
Sh3rf3Q8C120 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf3Q8C120 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf3Q8C120 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf3Q8C120 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sh3rf3Q8C120 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3rf3Q8C120 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Sh3rf3Q8C120 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3rf3Q8C120 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3rf3Q8C120 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.47■□□□□ 0.87
Sh3rf3Q8C120 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.47■□□□□ 0.87
Sh3rf3Q8C120 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3rf3Q8C120 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.47■□□□□ 0.87
Sh3rf3Q8C120 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3rf3Q8C120 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3rf3Q8C120 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf3Q8C120 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.46■□□□□ 0.87
Sh3rf3Q8C120 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf3Q8C120 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf3Q8C120 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.46■□□□□ 0.87
Sh3rf3Q8C120 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
Sh3rf3Q8C120 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf3Q8C120 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf3Q8C120 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf3Q8C120 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms