Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lig4Q8BTF7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lig4Q8BTF7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Lig4Q8BTF7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Lig4Q8BTF7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lig4Q8BTF7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lig4Q8BTF7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lig4Q8BTF7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lig4Q8BTF7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lig4Q8BTF7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lig4Q8BTF7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lig4Q8BTF7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lig4Q8BTF7 Gm11421-201ENSMUST00000122124 294 ntBASIC20.9■□□□□ 0.94
Lig4Q8BTF7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lig4Q8BTF7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lig4Q8BTF7 Gm43060-201ENSMUST00000200621 289 ntBASIC20.9■□□□□ 0.94
Lig4Q8BTF7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lig4Q8BTF7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Lig4Q8BTF7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Lig4Q8BTF7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Lig4Q8BTF7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lig4Q8BTF7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lig4Q8BTF7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lig4Q8BTF7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lig4Q8BTF7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.89■□□□□ 0.93
Lig4Q8BTF7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lig4Q8BTF7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lig4Q8BTF7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lig4Q8BTF7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lig4Q8BTF7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lig4Q8BTF7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Lig4Q8BTF7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Lig4Q8BTF7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lig4Q8BTF7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lig4Q8BTF7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lig4Q8BTF7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lig4Q8BTF7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lig4Q8BTF7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.87■□□□□ 0.93
Lig4Q8BTF7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lig4Q8BTF7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lig4Q8BTF7 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.87■□□□□ 0.93
Lig4Q8BTF7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lig4Q8BTF7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lig4Q8BTF7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Lig4Q8BTF7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lig4Q8BTF7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lig4Q8BTF7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lig4Q8BTF7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lig4Q8BTF7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Lig4Q8BTF7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.86■□□□□ 0.93
Lig4Q8BTF7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lig4Q8BTF7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Lig4Q8BTF7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lig4Q8BTF7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lig4Q8BTF7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Lig4Q8BTF7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lig4Q8BTF7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Lig4Q8BTF7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.84■□□□□ 0.93
Lig4Q8BTF7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lig4Q8BTF7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lig4Q8BTF7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.84■□□□□ 0.93
Lig4Q8BTF7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lig4Q8BTF7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lig4Q8BTF7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.83■□□□□ 0.93
Lig4Q8BTF7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lig4Q8BTF7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lig4Q8BTF7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lig4Q8BTF7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.83■□□□□ 0.93
Lig4Q8BTF7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lig4Q8BTF7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lig4Q8BTF7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.83■□□□□ 0.93
Lig4Q8BTF7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lig4Q8BTF7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.83■□□□□ 0.92
Lig4Q8BTF7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lig4Q8BTF7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Lig4Q8BTF7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Lig4Q8BTF7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lig4Q8BTF7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lig4Q8BTF7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.82■□□□□ 0.92
Lig4Q8BTF7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lig4Q8BTF7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Lig4Q8BTF7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lig4Q8BTF7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lig4Q8BTF7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lig4Q8BTF7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lig4Q8BTF7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lig4Q8BTF7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms