Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cc2d1bQ8BRN9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cc2d1bQ8BRN9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.75■■□□□ 1.07
Cc2d1bQ8BRN9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cc2d1bQ8BRN9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cc2d1bQ8BRN9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cc2d1bQ8BRN9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cc2d1bQ8BRN9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cc2d1bQ8BRN9 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.75■■□□□ 1.07
Cc2d1bQ8BRN9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cc2d1bQ8BRN9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cc2d1bQ8BRN9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cc2d1bQ8BRN9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cc2d1bQ8BRN9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cc2d1bQ8BRN9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cc2d1bQ8BRN9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cc2d1bQ8BRN9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.74■■□□□ 1.07
Cc2d1bQ8BRN9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Cc2d1bQ8BRN9 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.74■■□□□ 1.07
Cc2d1bQ8BRN9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cc2d1bQ8BRN9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cc2d1bQ8BRN9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Cc2d1bQ8BRN9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Cc2d1bQ8BRN9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cc2d1bQ8BRN9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cc2d1bQ8BRN9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cc2d1bQ8BRN9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.73■■□□□ 1.07
Cc2d1bQ8BRN9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cc2d1bQ8BRN9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cc2d1bQ8BRN9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cc2d1bQ8BRN9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cc2d1bQ8BRN9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cc2d1bQ8BRN9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cc2d1bQ8BRN9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cc2d1bQ8BRN9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cc2d1bQ8BRN9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cc2d1bQ8BRN9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cc2d1bQ8BRN9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cc2d1bQ8BRN9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cc2d1bQ8BRN9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cc2d1bQ8BRN9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cc2d1bQ8BRN9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Cc2d1bQ8BRN9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.7■■□□□ 1.07
Cc2d1bQ8BRN9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cc2d1bQ8BRN9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.7■■□□□ 1.06
Cc2d1bQ8BRN9 Golgb1-201ENSMUST00000023534 498 ntBASIC21.7■■□□□ 1.06
Cc2d1bQ8BRN9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cc2d1bQ8BRN9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Cc2d1bQ8BRN9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cc2d1bQ8BRN9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cc2d1bQ8BRN9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.69■■□□□ 1.06
Cc2d1bQ8BRN9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cc2d1bQ8BRN9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cc2d1bQ8BRN9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Cc2d1bQ8BRN9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.69■■□□□ 1.06
Cc2d1bQ8BRN9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.69■■□□□ 1.06
Cc2d1bQ8BRN9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cc2d1bQ8BRN9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cc2d1bQ8BRN9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cc2d1bQ8BRN9 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.68■■□□□ 1.06
Cc2d1bQ8BRN9 Golph3-202ENSMUST00000226517 2359 ntBASIC21.68■■□□□ 1.06
Cc2d1bQ8BRN9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms