Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.7■■□□□ 1.22
Scfd1Q8BRF7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.7■■□□□ 1.22
Scfd1Q8BRF7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scfd1Q8BRF7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scfd1Q8BRF7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.69■■□□□ 1.22
Scfd1Q8BRF7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scfd1Q8BRF7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Scfd1Q8BRF7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.69■■□□□ 1.22
Scfd1Q8BRF7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scfd1Q8BRF7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.69■■□□□ 1.22
Scfd1Q8BRF7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scfd1Q8BRF7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Scfd1Q8BRF7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scfd1Q8BRF7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Scfd1Q8BRF7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Scfd1Q8BRF7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.66■■□□□ 1.22
Scfd1Q8BRF7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.66■■□□□ 1.22
Scfd1Q8BRF7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Scfd1Q8BRF7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scfd1Q8BRF7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.66■■□□□ 1.22
Scfd1Q8BRF7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
Scfd1Q8BRF7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scfd1Q8BRF7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
Scfd1Q8BRF7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scfd1Q8BRF7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.65■■□□□ 1.22
Scfd1Q8BRF7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Scfd1Q8BRF7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scfd1Q8BRF7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.65■■□□□ 1.22
Scfd1Q8BRF7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scfd1Q8BRF7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scfd1Q8BRF7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scfd1Q8BRF7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scfd1Q8BRF7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scfd1Q8BRF7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scfd1Q8BRF7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Scfd1Q8BRF7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Scfd1Q8BRF7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.64■■□□□ 1.21
Scfd1Q8BRF7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scfd1Q8BRF7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.64■■□□□ 1.21
Scfd1Q8BRF7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scfd1Q8BRF7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scfd1Q8BRF7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Scfd1Q8BRF7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
Scfd1Q8BRF7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.63■■□□□ 1.21
Scfd1Q8BRF7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Scfd1Q8BRF7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.63■■□□□ 1.21
Scfd1Q8BRF7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scfd1Q8BRF7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scfd1Q8BRF7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scfd1Q8BRF7 Gm37179-201ENSMUST00000194862 823 ntBASIC22.63■■□□□ 1.21
Scfd1Q8BRF7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scfd1Q8BRF7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Scfd1Q8BRF7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.62■■□□□ 1.21
Scfd1Q8BRF7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scfd1Q8BRF7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Scfd1Q8BRF7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scfd1Q8BRF7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Gm13234-201ENSMUST00000120010 747 ntBASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Reep4-203ENSMUST00000226563 1444 ntBASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms