Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh20Q8BIZ0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh20Q8BIZ0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh20Q8BIZ0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh20Q8BIZ0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Pcdh20Q8BIZ0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh20Q8BIZ0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh20Q8BIZ0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdh20Q8BIZ0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh20Q8BIZ0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh20Q8BIZ0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Pcdh20Q8BIZ0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh20Q8BIZ0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh20Q8BIZ0 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.16■□□□□ 0.66
Pcdh20Q8BIZ0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh20Q8BIZ0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh20Q8BIZ0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh20Q8BIZ0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdh20Q8BIZ0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdh20Q8BIZ0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdh20Q8BIZ0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdh20Q8BIZ0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdh20Q8BIZ0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh20Q8BIZ0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdh20Q8BIZ0 Gm7143-201ENSMUST00000222811 859 ntBASIC19.14■□□□□ 0.65
Pcdh20Q8BIZ0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pcdh20Q8BIZ0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh20Q8BIZ0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdh20Q8BIZ0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh20Q8BIZ0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh20Q8BIZ0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh20Q8BIZ0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh20Q8BIZ0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh20Q8BIZ0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdh20Q8BIZ0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh20Q8BIZ0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh20Q8BIZ0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdh20Q8BIZ0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh20Q8BIZ0 Gm21956-201ENSMUST00000179946 522 ntBASIC19.13■□□□□ 0.65
Pcdh20Q8BIZ0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdh20Q8BIZ0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Pcdh20Q8BIZ0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh20Q8BIZ0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh20Q8BIZ0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh20Q8BIZ0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh20Q8BIZ0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pcdh20Q8BIZ0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh20Q8BIZ0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh20Q8BIZ0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.12■□□□□ 0.65
Pcdh20Q8BIZ0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh20Q8BIZ0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh20Q8BIZ0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh20Q8BIZ0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh20Q8BIZ0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh20Q8BIZ0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh20Q8BIZ0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh20Q8BIZ0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.11■□□□□ 0.65
Pcdh20Q8BIZ0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh20Q8BIZ0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh20Q8BIZ0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh20Q8BIZ0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdh20Q8BIZ0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh20Q8BIZ0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh20Q8BIZ0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdh20Q8BIZ0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.1■□□□□ 0.65
Pcdh20Q8BIZ0 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.1■□□□□ 0.65
Pcdh20Q8BIZ0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh20Q8BIZ0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh20Q8BIZ0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdh20Q8BIZ0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh20Q8BIZ0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Pcdh20Q8BIZ0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh20Q8BIZ0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Pcdh20Q8BIZ0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdh20Q8BIZ0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.09■□□□□ 0.65
Pcdh20Q8BIZ0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh20Q8BIZ0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdh20Q8BIZ0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh20Q8BIZ0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms