Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.17■□□□□ 0.98
Trim65Q8BFW4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Gm13241-201ENSMUST00000094493 780 ntBASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim65Q8BFW4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim65Q8BFW4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim65Q8BFW4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.15■□□□□ 0.98
Trim65Q8BFW4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trim65Q8BFW4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim65Q8BFW4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim65Q8BFW4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim65Q8BFW4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim65Q8BFW4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim65Q8BFW4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim65Q8BFW4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim65Q8BFW4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim65Q8BFW4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim65Q8BFW4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim65Q8BFW4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim65Q8BFW4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.14■□□□□ 0.98
Trim65Q8BFW4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim65Q8BFW4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim65Q8BFW4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim65Q8BFW4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim65Q8BFW4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim65Q8BFW4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Trim65Q8BFW4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim65Q8BFW4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.14■□□□□ 0.97
Trim65Q8BFW4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim65Q8BFW4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
Trim65Q8BFW4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim65Q8BFW4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim65Q8BFW4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim65Q8BFW4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim65Q8BFW4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Trim65Q8BFW4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim65Q8BFW4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim65Q8BFW4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim65Q8BFW4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim65Q8BFW4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim65Q8BFW4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim65Q8BFW4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.11■□□□□ 0.97
Trim65Q8BFW4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim65Q8BFW4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim65Q8BFW4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim65Q8BFW4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim65Q8BFW4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim65Q8BFW4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim65Q8BFW4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim65Q8BFW4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim65Q8BFW4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim65Q8BFW4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim65Q8BFW4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.1■□□□□ 0.97
Trim65Q8BFW4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trim65Q8BFW4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim65Q8BFW4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim65Q8BFW4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim65Q8BFW4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim65Q8BFW4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim65Q8BFW4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim65Q8BFW4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim65Q8BFW4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim65Q8BFW4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim65Q8BFW4 Golph3-202ENSMUST00000226517 2359 ntBASIC21.09■□□□□ 0.97
Trim65Q8BFW4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms