Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim62Q80V85 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim62Q80V85 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
Trim62Q80V85 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Trim62Q80V85 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Trim62Q80V85 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim62Q80V85 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim62Q80V85 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Trim62Q80V85 Smad6-203ENSMUST00000179458 273 ntBASIC20.45■□□□□ 0.86
Trim62Q80V85 Gm43017-201ENSMUST00000198296 752 ntBASIC20.45■□□□□ 0.86
Trim62Q80V85 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim62Q80V85 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim62Q80V85 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim62Q80V85 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim62Q80V85 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim62Q80V85 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim62Q80V85 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim62Q80V85 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim62Q80V85 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim62Q80V85 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trim62Q80V85 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim62Q80V85 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trim62Q80V85 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.44■□□□□ 0.86
Trim62Q80V85 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim62Q80V85 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim62Q80V85 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.44■□□□□ 0.86
Trim62Q80V85 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim62Q80V85 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim62Q80V85 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim62Q80V85 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim62Q80V85 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim62Q80V85 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Trim62Q80V85 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim62Q80V85 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim62Q80V85 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trim62Q80V85 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Trim62Q80V85 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim62Q80V85 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim62Q80V85 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim62Q80V85 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim62Q80V85 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim62Q80V85 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim62Q80V85 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim62Q80V85 Gm26833-201ENSMUST00000180899 440 ntBASIC20.42■□□□□ 0.86
Trim62Q80V85 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim62Q80V85 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim62Q80V85 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim62Q80V85 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim62Q80V85 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.41■□□□□ 0.86
Trim62Q80V85 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.41■□□□□ 0.86
Trim62Q80V85 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim62Q80V85 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim62Q80V85 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim62Q80V85 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim62Q80V85 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.41■□□□□ 0.86
Trim62Q80V85 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.41■□□□□ 0.86
Trim62Q80V85 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.41■□□□□ 0.86
Trim62Q80V85 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Trim62Q80V85 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim62Q80V85 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim62Q80V85 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim62Q80V85 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim62Q80V85 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim62Q80V85 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.4■□□□□ 0.86
Trim62Q80V85 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim62Q80V85 Gm11421-201ENSMUST00000122124 294 ntBASIC20.4■□□□□ 0.86
Trim62Q80V85 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.4■□□□□ 0.86
Trim62Q80V85 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.4■□□□□ 0.86
Trim62Q80V85 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim62Q80V85 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim62Q80V85 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trim62Q80V85 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim62Q80V85 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim62Q80V85 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trim62Q80V85 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim62Q80V85 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Trim62Q80V85 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim62Q80V85 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Trim62Q80V85 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Trim62Q80V85 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Trim62Q80V85 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim62Q80V85 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.38■□□□□ 0.85
Trim62Q80V85 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim62Q80V85 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim62Q80V85 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim62Q80V85 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim62Q80V85 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.38■□□□□ 0.85
Trim62Q80V85 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.38■□□□□ 0.85
Trim62Q80V85 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.38■□□□□ 0.85
Trim62Q80V85 Serp2-204ENSMUST00000228055 705 ntBASIC20.38■□□□□ 0.85
Trim62Q80V85 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim62Q80V85 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim62Q80V85 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim62Q80V85 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim62Q80V85 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim62Q80V85 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim62Q80V85 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim62Q80V85 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim62Q80V85 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim62Q80V85 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms