Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc46a1Q6PEM8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.32■□□□□ 0.36
Slc46a1Q6PEM8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc46a1Q6PEM8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.32■□□□□ 0.36
Slc46a1Q6PEM8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slc46a1Q6PEM8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc46a1Q6PEM8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slc46a1Q6PEM8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc46a1Q6PEM8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a1Q6PEM8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a1Q6PEM8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a1Q6PEM8 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.31■□□□□ 0.36
Slc46a1Q6PEM8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slc46a1Q6PEM8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a1Q6PEM8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slc46a1Q6PEM8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a1Q6PEM8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc46a1Q6PEM8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Slc46a1Q6PEM8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc46a1Q6PEM8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a1Q6PEM8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a1Q6PEM8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Slc46a1Q6PEM8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a1Q6PEM8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a1Q6PEM8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a1Q6PEM8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc46a1Q6PEM8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Slc46a1Q6PEM8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc46a1Q6PEM8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc46a1Q6PEM8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc46a1Q6PEM8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Slc46a1Q6PEM8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Slc46a1Q6PEM8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a1Q6PEM8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Slc46a1Q6PEM8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a1Q6PEM8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Slc46a1Q6PEM8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Slc46a1Q6PEM8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.27■□□□□ 0.36
Slc46a1Q6PEM8 Gm10493-201ENSMUST00000097270 612 ntBASIC17.27■□□□□ 0.36
Slc46a1Q6PEM8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc46a1Q6PEM8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Gm11421-201ENSMUST00000122124 294 ntBASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc46a1Q6PEM8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.25■□□□□ 0.35
Slc46a1Q6PEM8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a1Q6PEM8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a1Q6PEM8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Slc46a1Q6PEM8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc46a1Q6PEM8 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms