Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srsf1Q6PDM2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.17■□□□□ 0.34
Srsf1Q6PDM2 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.17■□□□□ 0.34
Srsf1Q6PDM2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srsf1Q6PDM2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Srsf1Q6PDM2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srsf1Q6PDM2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srsf1Q6PDM2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srsf1Q6PDM2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srsf1Q6PDM2 Gm13146-201ENSMUST00000118508 780 ntBASIC17.16■□□□□ 0.34
Srsf1Q6PDM2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srsf1Q6PDM2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srsf1Q6PDM2 Gm6576-201ENSMUST00000169678 883 ntBASIC17.16■□□□□ 0.34
Srsf1Q6PDM2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Srsf1Q6PDM2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Srsf1Q6PDM2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Srsf1Q6PDM2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Srsf1Q6PDM2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srsf1Q6PDM2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srsf1Q6PDM2 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.15■□□□□ 0.34
Srsf1Q6PDM2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srsf1Q6PDM2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.15■□□□□ 0.34
Srsf1Q6PDM2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Srsf1Q6PDM2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.15■□□□□ 0.34
Srsf1Q6PDM2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srsf1Q6PDM2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Srsf1Q6PDM2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Srsf1Q6PDM2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srsf1Q6PDM2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.14■□□□□ 0.33
Srsf1Q6PDM2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srsf1Q6PDM2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.14■□□□□ 0.33
Srsf1Q6PDM2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.14■□□□□ 0.33
Srsf1Q6PDM2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Srsf1Q6PDM2 Gm6211-202ENSMUST00000167849 925 ntBASIC17.14■□□□□ 0.33
Srsf1Q6PDM2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Srsf1Q6PDM2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Srsf1Q6PDM2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Gm6420-201ENSMUST00000193885 723 ntBASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Srsf1Q6PDM2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Srsf1Q6PDM2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Srsf1Q6PDM2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srsf1Q6PDM2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srsf1Q6PDM2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.11■□□□□ 0.33
Srsf1Q6PDM2 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.11■□□□□ 0.33
Srsf1Q6PDM2 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.11■□□□□ 0.33
Srsf1Q6PDM2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srsf1Q6PDM2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srsf1Q6PDM2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srsf1Q6PDM2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Srsf1Q6PDM2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Srsf1Q6PDM2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Gm15565-201ENSMUST00000118890 427 ntBASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Srsf1Q6PDM2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms