Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp50Q6P8X6 Gm11421-201ENSMUST00000122124 294 ntBASIC22.84■■□□□ 1.25
Usp50Q6P8X6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.84■■□□□ 1.25
Usp50Q6P8X6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp50Q6P8X6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Usp50Q6P8X6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp50Q6P8X6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp50Q6P8X6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Usp50Q6P8X6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Usp50Q6P8X6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Usp50Q6P8X6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Usp50Q6P8X6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Usp50Q6P8X6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.83■■□□□ 1.25
Usp50Q6P8X6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Usp50Q6P8X6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.83■■□□□ 1.25
Usp50Q6P8X6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.83■■□□□ 1.25
Usp50Q6P8X6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Usp50Q6P8X6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.83■■□□□ 1.25
Usp50Q6P8X6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Usp50Q6P8X6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Usp50Q6P8X6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Usp50Q6P8X6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp50Q6P8X6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Usp50Q6P8X6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.81■■□□□ 1.24
Usp50Q6P8X6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.81■■□□□ 1.24
Usp50Q6P8X6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Usp50Q6P8X6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp50Q6P8X6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp50Q6P8X6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Usp50Q6P8X6 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.81■■□□□ 1.24
Usp50Q6P8X6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp50Q6P8X6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp50Q6P8X6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp50Q6P8X6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp50Q6P8X6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp50Q6P8X6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Usp50Q6P8X6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp50Q6P8X6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp50Q6P8X6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp50Q6P8X6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Usp50Q6P8X6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Gm8495-201ENSMUST00000188740 694 ntBASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp50Q6P8X6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Usp50Q6P8X6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
Usp50Q6P8X6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Usp50Q6P8X6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.78■■□□□ 1.24
Usp50Q6P8X6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp50Q6P8X6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.77■■□□□ 1.24
Usp50Q6P8X6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp50Q6P8X6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Usp50Q6P8X6 Gm5874-201ENSMUST00000096101 508 ntBASIC22.76■■□□□ 1.23
Usp50Q6P8X6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Usp50Q6P8X6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Usp50Q6P8X6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.75■■□□□ 1.23
Usp50Q6P8X6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms