Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc1Q61572 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc1Q61572 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.35□□□□□ -0.11
Foxc1Q61572 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Foxc1Q61572 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxc1Q61572 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxc1Q61572 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxc1Q61572 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.34□□□□□ -0.11
Foxc1Q61572 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxc1Q61572 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
Foxc1Q61572 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Foxc1Q61572 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxc1Q61572 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxc1Q61572 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxc1Q61572 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Foxc1Q61572 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Foxc1Q61572 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Foxc1Q61572 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Foxc1Q61572 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxc1Q61572 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Foxc1Q61572 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.33□□□□□ -0.12
Foxc1Q61572 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.33□□□□□ -0.12
Foxc1Q61572 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Foxc1Q61572 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Foxc1Q61572 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Foxc1Q61572 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.32□□□□□ -0.12
Foxc1Q61572 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.32□□□□□ -0.12
Foxc1Q61572 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.32□□□□□ -0.12
Foxc1Q61572 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Foxc1Q61572 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxc1Q61572 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxc1Q61572 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Foxc1Q61572 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Foxc1Q61572 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxc1Q61572 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxc1Q61572 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxc1Q61572 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxc1Q61572 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Foxc1Q61572 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.31□□□□□ -0.12
Foxc1Q61572 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.31□□□□□ -0.12
Foxc1Q61572 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxc1Q61572 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxc1Q61572 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Foxc1Q61572 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxc1Q61572 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxc1Q61572 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Foxc1Q61572 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxc1Q61572 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.3□□□□□ -0.12
Foxc1Q61572 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Foxc1Q61572 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Foxc1Q61572 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc1Q61572 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc1Q61572 Mir6236-201ENSMUST00000184437 123 ntBASIC14.29□□□□□ -0.12
Foxc1Q61572 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.29□□□□□ -0.12
Foxc1Q61572 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.29□□□□□ -0.12
Foxc1Q61572 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc1Q61572 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc1Q61572 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc1Q61572 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Foxc1Q61572 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc1Q61572 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Foxc1Q61572 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc1Q61572 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Foxc1Q61572 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Foxc1Q61572 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxc1Q61572 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc1Q61572 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Foxc1Q61572 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Foxc1Q61572 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc1Q61572 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Foxc1Q61572 Gm43137-201ENSMUST00000198052 594 ntBASIC14.28□□□□□ -0.12
Foxc1Q61572 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.28□□□□□ -0.12
Foxc1Q61572 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc1Q61572 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc1Q61572 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Foxc1Q61572 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc1Q61572 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.28□□□□□ -0.12
Foxc1Q61572 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms