Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.86■□□□□ 0.61
Xrcc1Q60596 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.86■□□□□ 0.61
Xrcc1Q60596 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc1Q60596 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrcc1Q60596 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc1Q60596 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Xrcc1Q60596 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Xrcc1Q60596 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.85■□□□□ 0.61
Xrcc1Q60596 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc1Q60596 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc1Q60596 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc1Q60596 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc1Q60596 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc1Q60596 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrcc1Q60596 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.84■□□□□ 0.61
Xrcc1Q60596 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Xrcc1Q60596 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.84■□□□□ 0.61
Xrcc1Q60596 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.84■□□□□ 0.61
Xrcc1Q60596 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Xrcc1Q60596 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xrcc1Q60596 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xrcc1Q60596 Gm43017-201ENSMUST00000198296 752 ntBASIC18.84■□□□□ 0.61
Xrcc1Q60596 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.84■□□□□ 0.61
Xrcc1Q60596 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xrcc1Q60596 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.84■□□□□ 0.61
Xrcc1Q60596 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xrcc1Q60596 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Xrcc1Q60596 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Xrcc1Q60596 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Xrcc1Q60596 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Xrcc1Q60596 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.83■□□□□ 0.61
Xrcc1Q60596 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Xrcc1Q60596 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Xrcc1Q60596 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.83■□□□□ 0.6
Xrcc1Q60596 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Xrcc1Q60596 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Xrcc1Q60596 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Xrcc1Q60596 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Xrcc1Q60596 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.83■□□□□ 0.6
Xrcc1Q60596 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Xrcc1Q60596 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc1Q60596 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc1Q60596 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc1Q60596 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.82■□□□□ 0.6
Xrcc1Q60596 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc1Q60596 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Xrcc1Q60596 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.82■□□□□ 0.6
Xrcc1Q60596 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc1Q60596 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc1Q60596 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc1Q60596 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc1Q60596 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Xrcc1Q60596 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Xrcc1Q60596 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.81■□□□□ 0.6
Xrcc1Q60596 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.81■□□□□ 0.6
Xrcc1Q60596 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc1Q60596 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc1Q60596 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Xrcc1Q60596 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Xrcc1Q60596 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc1Q60596 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.81■□□□□ 0.6
Xrcc1Q60596 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc1Q60596 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Xrcc1Q60596 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.8■□□□□ 0.6
Xrcc1Q60596 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc1Q60596 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.79■□□□□ 0.6
Xrcc1Q60596 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Xrcc1Q60596 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Xrcc1Q60596 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrcc1Q60596 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Xrcc1Q60596 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Xrcc1Q60596 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms