Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav5d-4Q5R1F6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5d-4Q5R1F6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5d-4Q5R1F6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5d-4Q5R1F6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5d-4Q5R1F6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5d-4Q5R1F6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav5d-4Q5R1F6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5d-4Q5R1F6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5d-4Q5R1F6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav5d-4Q5R1F6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5d-4Q5R1F6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5d-4Q5R1F6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5d-4Q5R1F6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5d-4Q5R1F6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5d-4Q5R1F6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav5d-4Q5R1F6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5d-4Q5R1F6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav5d-4Q5R1F6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav5d-4Q5R1F6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav5d-4Q5R1F6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav5d-4Q5R1F6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav5d-4Q5R1F6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav5d-4Q5R1F6 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.89■□□□□ 0.3
Trav5d-4Q5R1F6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav5d-4Q5R1F6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5d-4Q5R1F6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5d-4Q5R1F6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5d-4Q5R1F6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5d-4Q5R1F6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5d-4Q5R1F6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5d-4Q5R1F6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5d-4Q5R1F6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5d-4Q5R1F6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav5d-4Q5R1F6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav5d-4Q5R1F6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5d-4Q5R1F6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5d-4Q5R1F6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5d-4Q5R1F6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav5d-4Q5R1F6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5d-4Q5R1F6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5d-4Q5R1F6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5d-4Q5R1F6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5d-4Q5R1F6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5d-4Q5R1F6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5d-4Q5R1F6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5d-4Q5R1F6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms