Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Urb1Q571H0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Urb1Q571H0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Urb1Q571H0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Urb1Q571H0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Urb1Q571H0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.16■□□□□ 0.5
Urb1Q571H0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Urb1Q571H0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Urb1Q571H0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Urb1Q571H0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Urb1Q571H0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Urb1Q571H0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.16■□□□□ 0.5
Urb1Q571H0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.16■□□□□ 0.5
Urb1Q571H0 Gm10252-201ENSMUST00000209541 832 ntBASIC18.16■□□□□ 0.5
Urb1Q571H0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Urb1Q571H0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Urb1Q571H0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Urb1Q571H0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Urb1Q571H0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Urb1Q571H0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Urb1Q571H0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Urb1Q571H0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.15■□□□□ 0.5
Urb1Q571H0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Urb1Q571H0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Urb1Q571H0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Urb1Q571H0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Urb1Q571H0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Urb1Q571H0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Urb1Q571H0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Urb1Q571H0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Urb1Q571H0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Urb1Q571H0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
Urb1Q571H0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Urb1Q571H0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.14■□□□□ 0.49
Urb1Q571H0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Urb1Q571H0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Urb1Q571H0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Urb1Q571H0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Urb1Q571H0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.14■□□□□ 0.49
Urb1Q571H0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Urb1Q571H0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Urb1Q571H0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Urb1Q571H0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Urb1Q571H0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Urb1Q571H0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.12■□□□□ 0.49
Urb1Q571H0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Urb1Q571H0 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.12■□□□□ 0.49
Urb1Q571H0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Urb1Q571H0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Urb1Q571H0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Urb1Q571H0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Urb1Q571H0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Urb1Q571H0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.11■□□□□ 0.49
Urb1Q571H0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.11■□□□□ 0.49
Urb1Q571H0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Urb1Q571H0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Urb1Q571H0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Urb1Q571H0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Urb1Q571H0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Urb1Q571H0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Urb1Q571H0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.11■□□□□ 0.49
Urb1Q571H0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Urb1Q571H0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Urb1Q571H0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Urb1Q571H0 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.1■□□□□ 0.49
Urb1Q571H0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Urb1Q571H0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Urb1Q571H0 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.1■□□□□ 0.49
Urb1Q571H0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Urb1Q571H0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Urb1Q571H0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Urb1Q571H0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Urb1Q571H0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.1■□□□□ 0.49
Urb1Q571H0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Urb1Q571H0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Urb1Q571H0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.09■□□□□ 0.49
Urb1Q571H0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Urb1Q571H0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Urb1Q571H0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Urb1Q571H0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.08■□□□□ 0.48
Urb1Q571H0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Urb1Q571H0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.08■□□□□ 0.48
Urb1Q571H0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.08■□□□□ 0.48
Urb1Q571H0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Urb1Q571H0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Urb1Q571H0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Urb1Q571H0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Urb1Q571H0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Urb1Q571H0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Urb1Q571H0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.07■□□□□ 0.48
Urb1Q571H0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.07■□□□□ 0.48
Urb1Q571H0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
Urb1Q571H0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Urb1Q571H0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Urb1Q571H0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.07■□□□□ 0.48
Urb1Q571H0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Urb1Q571H0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Urb1Q571H0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Urb1Q571H0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Urb1Q571H0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms