Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Arhgef40Q3UPH7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Arhgef40Q3UPH7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Arhgef40Q3UPH7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Arhgef40Q3UPH7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
Arhgef40Q3UPH7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Arhgef40Q3UPH7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Arhgef40Q3UPH7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC29.54■■■□□ 2.32
Arhgef40Q3UPH7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Arhgef40Q3UPH7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Arhgef40Q3UPH7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Arhgef40Q3UPH7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC29.53■■■□□ 2.32
Arhgef40Q3UPH7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Arhgef40Q3UPH7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Arhgef40Q3UPH7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Arhgef40Q3UPH7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Arhgef40Q3UPH7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC29.52■■■□□ 2.32
Arhgef40Q3UPH7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
Arhgef40Q3UPH7 Gm12441-201ENSMUST00000121806 588 ntBASIC29.52■■■□□ 2.32
Arhgef40Q3UPH7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Arhgef40Q3UPH7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Arhgef40Q3UPH7 Gm13148-201ENSMUST00000118892 745 ntBASIC29.51■■■□□ 2.32
Arhgef40Q3UPH7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
Arhgef40Q3UPH7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
Arhgef40Q3UPH7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Arhgef40Q3UPH7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC29.49■■■□□ 2.31
Arhgef40Q3UPH7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Arhgef40Q3UPH7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Arhgef40Q3UPH7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
Arhgef40Q3UPH7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Arhgef40Q3UPH7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Arhgef40Q3UPH7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Arhgef40Q3UPH7 Gm42911-201ENSMUST00000199360 1630 ntBASIC29.49■■■□□ 2.31
Arhgef40Q3UPH7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Arhgef40Q3UPH7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC29.49■■■□□ 2.31
Arhgef40Q3UPH7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC29.48■■■□□ 2.31
Arhgef40Q3UPH7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Arhgef40Q3UPH7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Arhgef40Q3UPH7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC29.48■■■□□ 2.31
Arhgef40Q3UPH7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC29.48■■■□□ 2.31
Arhgef40Q3UPH7 Gm22325-201ENSMUST00000158904 308 ntBASIC29.48■■■□□ 2.31
Arhgef40Q3UPH7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC29.48■■■□□ 2.31
Arhgef40Q3UPH7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC29.48■■■□□ 2.31
Arhgef40Q3UPH7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Arhgef40Q3UPH7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
Arhgef40Q3UPH7 Gm38205-201ENSMUST00000192243 258 ntBASIC29.47■■■□□ 2.31
Arhgef40Q3UPH7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
Arhgef40Q3UPH7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Arhgef40Q3UPH7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Arhgef40Q3UPH7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC29.46■■■□□ 2.31
Arhgef40Q3UPH7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Arhgef40Q3UPH7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Arhgef40Q3UPH7 Dmtn-209ENSMUST00000228295 2572 ntBASIC29.46■■■□□ 2.31
Arhgef40Q3UPH7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Arhgef40Q3UPH7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Arhgef40Q3UPH7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC29.45■■■□□ 2.31
Arhgef40Q3UPH7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Arhgef40Q3UPH7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Arhgef40Q3UPH7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC29.45■■■□□ 2.3
Arhgef40Q3UPH7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC29.45■■■□□ 2.3
Arhgef40Q3UPH7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Arhgef40Q3UPH7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Arhgef40Q3UPH7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
Arhgef40Q3UPH7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC29.43■■■□□ 2.3
Arhgef40Q3UPH7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
Arhgef40Q3UPH7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Arhgef40Q3UPH7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Arhgef40Q3UPH7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Arhgef40Q3UPH7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Arhgef40Q3UPH7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Arhgef40Q3UPH7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Arhgef40Q3UPH7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Arhgef40Q3UPH7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Arhgef40Q3UPH7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Arhgef40Q3UPH7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC29.41■■■□□ 2.3
Arhgef40Q3UPH7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms