Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a1Q05722 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a1Q05722 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a1Q05722 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a1Q05722 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a1Q05722 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Col9a1Q05722 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a1Q05722 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.59■□□□□ 0.73
Col9a1Q05722 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a1Q05722 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a1Q05722 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a1Q05722 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col9a1Q05722 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col9a1Q05722 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Col9a1Q05722 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col9a1Q05722 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Col9a1Q05722 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col9a1Q05722 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.58■□□□□ 0.72
Col9a1Q05722 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col9a1Q05722 Gm7461-201ENSMUST00000058918 827 ntBASIC19.58■□□□□ 0.72
Col9a1Q05722 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col9a1Q05722 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col9a1Q05722 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col9a1Q05722 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a1Q05722 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a1Q05722 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Col9a1Q05722 Gm12896-201ENSMUST00000118430 226 ntBASIC19.57■□□□□ 0.72
Col9a1Q05722 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.57■□□□□ 0.72
Col9a1Q05722 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.57■□□□□ 0.72
Col9a1Q05722 Gm6659-201ENSMUST00000174752 547 ntBASIC19.57■□□□□ 0.72
Col9a1Q05722 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a1Q05722 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Col9a1Q05722 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a1Q05722 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a1Q05722 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a1Q05722 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a1Q05722 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a1Q05722 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col9a1Q05722 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col9a1Q05722 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a1Q05722 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col9a1Q05722 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a1Q05722 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col9a1Q05722 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.56■□□□□ 0.72
Col9a1Q05722 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col9a1Q05722 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Col9a1Q05722 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a1Q05722 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a1Q05722 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a1Q05722 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a1Q05722 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Col9a1Q05722 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col9a1Q05722 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a1Q05722 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.55■□□□□ 0.72
Col9a1Q05722 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col9a1Q05722 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Col9a1Q05722 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col9a1Q05722 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col9a1Q05722 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col9a1Q05722 Rab3c-203ENSMUST00000224180 967 ntBASIC19.54■□□□□ 0.72
Col9a1Q05722 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col9a1Q05722 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col9a1Q05722 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Col9a1Q05722 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col9a1Q05722 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.53■□□□□ 0.72
Col9a1Q05722 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a1Q05722 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a1Q05722 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a1Q05722 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.53■□□□□ 0.72
Col9a1Q05722 Mir1199-201ENSMUST00000117015 119 ntBASIC19.53■□□□□ 0.72
Col9a1Q05722 Gm9103-201ENSMUST00000119371 405 ntBASIC19.53■□□□□ 0.72
Col9a1Q05722 Gm26524-201ENSMUST00000192339 390 ntBASIC19.53■□□□□ 0.72
Col9a1Q05722 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.53■□□□□ 0.72
Col9a1Q05722 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a1Q05722 Gm44771-201ENSMUST00000206975 626 ntBASIC19.53■□□□□ 0.72
Col9a1Q05722 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.53■□□□□ 0.72
Col9a1Q05722 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Col9a1Q05722 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a1Q05722 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col9a1Q05722 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Col9a1Q05722 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.52■□□□□ 0.72
Col9a1Q05722 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col9a1Q05722 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col9a1Q05722 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.52■□□□□ 0.72
Col9a1Q05722 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.52■□□□□ 0.72
Col9a1Q05722 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col9a1Q05722 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col9a1Q05722 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col9a1Q05722 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col9a1Q05722 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Col9a1Q05722 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col9a1Q05722 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.51■□□□□ 0.71
Col9a1Q05722 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Col9a1Q05722 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col9a1Q05722 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col9a1Q05722 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col9a1Q05722 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.5■□□□□ 0.71
Col9a1Q05722 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.5■□□□□ 0.71
Col9a1Q05722 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col9a1Q05722 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms