Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.45■□□□□ 0.7
Lhx1P63006 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx1P63006 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx1P63006 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx1P63006 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx1P63006 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx1P63006 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.44■□□□□ 0.7
Lhx1P63006 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx1P63006 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lhx1P63006 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx1P63006 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx1P63006 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx1P63006 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx1P63006 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lhx1P63006 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx1P63006 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx1P63006 Gm18284-201ENSMUST00000172604 624 ntBASIC19.43■□□□□ 0.7
Lhx1P63006 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.43■□□□□ 0.7
Lhx1P63006 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx1P63006 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx1P63006 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx1P63006 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx1P63006 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx1P63006 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx1P63006 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx1P63006 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Lhx1P63006 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx1P63006 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx1P63006 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx1P63006 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lhx1P63006 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx1P63006 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx1P63006 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.41■□□□□ 0.7
Lhx1P63006 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx1P63006 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.41■□□□□ 0.7
Lhx1P63006 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx1P63006 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lhx1P63006 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.41■□□□□ 0.7
Lhx1P63006 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx1P63006 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.41■□□□□ 0.7
Lhx1P63006 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Lhx1P63006 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx1P63006 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx1P63006 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx1P63006 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Lhx1P63006 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx1P63006 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx1P63006 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx1P63006 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx1P63006 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Lhx1P63006 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.4■□□□□ 0.7
Lhx1P63006 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx1P63006 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx1P63006 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx1P63006 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.4■□□□□ 0.7
Lhx1P63006 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx1P63006 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx1P63006 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.4■□□□□ 0.7
Lhx1P63006 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lhx1P63006 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lhx1P63006 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Lhx1P63006 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx1P63006 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.39■□□□□ 0.69
Lhx1P63006 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx1P63006 Gm8495-201ENSMUST00000188740 694 ntBASIC19.39■□□□□ 0.69
Lhx1P63006 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.39■□□□□ 0.69
Lhx1P63006 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx1P63006 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx1P63006 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Lhx1P63006 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx1P63006 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx1P63006 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx1P63006 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.38■□□□□ 0.69
Lhx1P63006 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx1P63006 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx1P63006 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx1P63006 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx1P63006 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx1P63006 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx1P63006 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lhx1P63006 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lhx1P63006 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx1P63006 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx1P63006 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx1P63006 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx1P63006 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx1P63006 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx1P63006 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx1P63006 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Lhx1P63006 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.37■□□□□ 0.69
Lhx1P63006 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.37■□□□□ 0.69
Lhx1P63006 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lhx1P63006 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Lhx1P63006 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lhx1P63006 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx1P63006 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx1P63006 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.36■□□□□ 0.69
Lhx1P63006 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx1P63006 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx1P63006 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms