Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxb9P20615 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hoxb9P20615 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxb9P20615 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxb9P20615 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.97■□□□□ 0.63
Hoxb9P20615 Gm13241-201ENSMUST00000094493 780 ntBASIC18.97■□□□□ 0.63
Hoxb9P20615 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxb9P20615 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxb9P20615 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxb9P20615 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.96■□□□□ 0.63
Hoxb9P20615 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.96■□□□□ 0.63
Hoxb9P20615 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.96■□□□□ 0.63
Hoxb9P20615 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Hoxb9P20615 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxb9P20615 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxb9P20615 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxb9P20615 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Hoxb9P20615 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxb9P20615 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxb9P20615 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Hoxb9P20615 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Hoxb9P20615 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Hoxb9P20615 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxb9P20615 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Hoxb9P20615 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.94■□□□□ 0.62
Hoxb9P20615 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxb9P20615 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxb9P20615 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Hoxb9P20615 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxb9P20615 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Hoxb9P20615 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Hoxb9P20615 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxb9P20615 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxb9P20615 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Hoxb9P20615 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxb9P20615 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxb9P20615 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxb9P20615 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Hoxb9P20615 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxb9P20615 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Hoxb9P20615 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.93■□□□□ 0.62
Hoxb9P20615 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.92■□□□□ 0.62
Hoxb9P20615 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxb9P20615 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxb9P20615 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.92■□□□□ 0.62
Hoxb9P20615 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.92■□□□□ 0.62
Hoxb9P20615 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxb9P20615 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxb9P20615 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxb9P20615 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxb9P20615 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxb9P20615 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxb9P20615 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxb9P20615 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxb9P20615 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxb9P20615 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Hoxb9P20615 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxb9P20615 Golph3-202ENSMUST00000226517 2359 ntBASIC18.91■□□□□ 0.62
Hoxb9P20615 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxb9P20615 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxb9P20615 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxb9P20615 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxb9P20615 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.91■□□□□ 0.62
Hoxb9P20615 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxb9P20615 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Hoxb9P20615 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxb9P20615 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hoxb9P20615 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Hoxb9P20615 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hoxb9P20615 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxb9P20615 Gm12251-201ENSMUST00000117893 792 ntBASIC18.9■□□□□ 0.62
Hoxb9P20615 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.9■□□□□ 0.62
Hoxb9P20615 Gm43137-201ENSMUST00000198052 594 ntBASIC18.9■□□□□ 0.62
Hoxb9P20615 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.9■□□□□ 0.62
Hoxb9P20615 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxb9P20615 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Hoxb9P20615 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.9■□□□□ 0.62
Hoxb9P20615 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxb9P20615 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxb9P20615 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxb9P20615 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hoxb9P20615 AA386476-201ENSMUST00000098781 1665 ntBASIC18.89■□□□□ 0.61
Hoxb9P20615 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxb9P20615 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxb9P20615 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxb9P20615 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxb9P20615 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms