Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfaP20033 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PdgfaP20033 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PdgfaP20033 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfaP20033 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfaP20033 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfaP20033 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.49■□□□□ 0.71
PdgfaP20033 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfaP20033 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfaP20033 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfaP20033 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfaP20033 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfaP20033 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.48■□□□□ 0.71
PdgfaP20033 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfaP20033 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PdgfaP20033 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfaP20033 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfaP20033 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfaP20033 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.48■□□□□ 0.71
PdgfaP20033 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.48■□□□□ 0.71
PdgfaP20033 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfaP20033 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfaP20033 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PdgfaP20033 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfaP20033 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PdgfaP20033 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfaP20033 Gm27454-201ENSMUST00000185090 204 ntBASIC19.47■□□□□ 0.71
PdgfaP20033 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfaP20033 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfaP20033 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfaP20033 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfaP20033 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfaP20033 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PdgfaP20033 Golph3-205ENSMUST00000228671 2842 ntBASIC19.46■□□□□ 0.71
PdgfaP20033 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
PdgfaP20033 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PdgfaP20033 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PdgfaP20033 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PdgfaP20033 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PdgfaP20033 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.46■□□□□ 0.71
PdgfaP20033 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.7
PdgfaP20033 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfaP20033 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfaP20033 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PdgfaP20033 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfaP20033 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.45■□□□□ 0.7
PdgfaP20033 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfaP20033 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.45■□□□□ 0.7
PdgfaP20033 Gm45417-201ENSMUST00000209533 758 ntBASIC19.45■□□□□ 0.7
PdgfaP20033 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfaP20033 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfaP20033 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfaP20033 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfaP20033 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfaP20033 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfaP20033 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PdgfaP20033 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PdgfaP20033 Gm12821-201ENSMUST00000120022 600 ntBASIC19.44■□□□□ 0.7
PdgfaP20033 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.44■□□□□ 0.7
PdgfaP20033 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PdgfaP20033 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.44■□□□□ 0.7
PdgfaP20033 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PdgfaP20033 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PdgfaP20033 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PdgfaP20033 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfaP20033 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfaP20033 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfaP20033 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfaP20033 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfaP20033 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfaP20033 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfaP20033 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.43■□□□□ 0.7
PdgfaP20033 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfaP20033 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.43■□□□□ 0.7
PdgfaP20033 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfaP20033 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.42■□□□□ 0.7
PdgfaP20033 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.42■□□□□ 0.7
PdgfaP20033 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfaP20033 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PdgfaP20033 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PdgfaP20033 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PdgfaP20033 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PdgfaP20033 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PdgfaP20033 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PdgfaP20033 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PdgfaP20033 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PdgfaP20033 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PdgfaP20033 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PdgfaP20033 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms