Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Col4a2P08122 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a2P08122 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a2P08122 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.69■□□□□ 0.58
Col4a2P08122 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.69■□□□□ 0.58
Col4a2P08122 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.69■□□□□ 0.58
Col4a2P08122 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.69■□□□□ 0.58
Col4a2P08122 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a2P08122 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a2P08122 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a2P08122 Mir6236-201ENSMUST00000184437 123 ntBASIC18.69■□□□□ 0.58
Col4a2P08122 Gm10602-201ENSMUST00000098239 609 ntBASIC18.69■□□□□ 0.58
Col4a2P08122 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a2P08122 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a2P08122 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.68■□□□□ 0.58
Col4a2P08122 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a2P08122 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a2P08122 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col4a2P08122 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col4a2P08122 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a2P08122 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a2P08122 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a2P08122 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.67■□□□□ 0.58
Col4a2P08122 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a2P08122 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a2P08122 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a2P08122 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a2P08122 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a2P08122 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a2P08122 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a2P08122 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a2P08122 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.66■□□□□ 0.58
Col4a2P08122 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a2P08122 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a2P08122 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a2P08122 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Col4a2P08122 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a2P08122 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.66■□□□□ 0.58
Col4a2P08122 Nespas-201ENSMUST00000143738 1083 ntBASIC18.66■□□□□ 0.58
Col4a2P08122 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a2P08122 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a2P08122 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a2P08122 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col4a2P08122 Gm12441-201ENSMUST00000121806 588 ntBASIC18.65■□□□□ 0.58
Col4a2P08122 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col4a2P08122 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col4a2P08122 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a2P08122 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.64■□□□□ 0.57
Col4a2P08122 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Col4a2P08122 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a2P08122 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a2P08122 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a2P08122 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.63■□□□□ 0.57
Col4a2P08122 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col4a2P08122 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.63■□□□□ 0.57
Col4a2P08122 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Col4a2P08122 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a2P08122 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a2P08122 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a2P08122 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a2P08122 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Col4a2P08122 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a2P08122 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a2P08122 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a2P08122 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a2P08122 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.62■□□□□ 0.57
Col4a2P08122 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a2P08122 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a2P08122 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a2P08122 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a2P08122 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a2P08122 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.62■□□□□ 0.57
Col4a2P08122 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a2P08122 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a2P08122 Gm10653-202ENSMUST00000139570 835 ntBASIC18.61■□□□□ 0.57
Col4a2P08122 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.61■□□□□ 0.57
Col4a2P08122 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a2P08122 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.61■□□□□ 0.57
Col4a2P08122 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a2P08122 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col4a2P08122 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a2P08122 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a2P08122 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a2P08122 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a2P08122 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a2P08122 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a2P08122 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a2P08122 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col4a2P08122 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.6■□□□□ 0.57
Col4a2P08122 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col4a2P08122 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a2P08122 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a2P08122 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a2P08122 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.59■□□□□ 0.57
Col4a2P08122 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Col4a2P08122 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a2P08122 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col4a2P08122 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Col4a2P08122 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a2P08122 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms