Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PdgfrbP05622 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
PdgfrbP05622 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
PdgfrbP05622 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
PdgfrbP05622 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PdgfrbP05622 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.94■□□□□ 0.78
PdgfrbP05622 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PdgfrbP05622 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
PdgfrbP05622 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PdgfrbP05622 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PdgfrbP05622 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PdgfrbP05622 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PdgfrbP05622 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PdgfrbP05622 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PdgfrbP05622 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PdgfrbP05622 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PdgfrbP05622 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PdgfrbP05622 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PdgfrbP05622 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PdgfrbP05622 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
PdgfrbP05622 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PdgfrbP05622 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PdgfrbP05622 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PdgfrbP05622 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PdgfrbP05622 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.92■□□□□ 0.78
PdgfrbP05622 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.92■□□□□ 0.78
PdgfrbP05622 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PdgfrbP05622 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
PdgfrbP05622 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PdgfrbP05622 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PdgfrbP05622 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PdgfrbP05622 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PdgfrbP05622 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PdgfrbP05622 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.92■□□□□ 0.78
PdgfrbP05622 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PdgfrbP05622 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PdgfrbP05622 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.91■□□□□ 0.78
PdgfrbP05622 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.91■□□□□ 0.78
PdgfrbP05622 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PdgfrbP05622 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PdgfrbP05622 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PdgfrbP05622 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PdgfrbP05622 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.9■□□□□ 0.78
PdgfrbP05622 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PdgfrbP05622 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PdgfrbP05622 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PdgfrbP05622 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PdgfrbP05622 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PdgfrbP05622 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PdgfrbP05622 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PdgfrbP05622 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.9■□□□□ 0.78
PdgfrbP05622 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PdgfrbP05622 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PdgfrbP05622 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.9■□□□□ 0.78
PdgfrbP05622 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PdgfrbP05622 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PdgfrbP05622 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PdgfrbP05622 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PdgfrbP05622 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PdgfrbP05622 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
PdgfrbP05622 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PdgfrbP05622 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PdgfrbP05622 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PdgfrbP05622 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PdgfrbP05622 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PdgfrbP05622 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.88■□□□□ 0.77
PdgfrbP05622 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 Gm43137-201ENSMUST00000198052 594 ntBASIC19.88■□□□□ 0.77
PdgfrbP05622 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PdgfrbP05622 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PdgfrbP05622 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.87■□□□□ 0.77
PdgfrbP05622 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PdgfrbP05622 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.87■□□□□ 0.77
PdgfrbP05622 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PdgfrbP05622 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.87■□□□□ 0.77
PdgfrbP05622 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PdgfrbP05622 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PdgfrbP05622 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
PdgfrbP05622 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PdgfrbP05622 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PdgfrbP05622 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PdgfrbP05622 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PdgfrbP05622 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PdgfrbP05622 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PdgfrbP05622 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PdgfrbP05622 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PdgfrbP05622 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PdgfrbP05622 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PdgfrbP05622 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PdgfrbP05622 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms