Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hdac3O88895 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac3O88895 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac3O88895 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac3O88895 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac3O88895 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac3O88895 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hdac3O88895 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac3O88895 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hdac3O88895 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.53■□□□□ 0.4
Hdac3O88895 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac3O88895 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac3O88895 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.53■□□□□ 0.4
Hdac3O88895 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.53■□□□□ 0.4
Hdac3O88895 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.53■□□□□ 0.4
Hdac3O88895 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac3O88895 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
Hdac3O88895 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac3O88895 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hdac3O88895 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hdac3O88895 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac3O88895 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac3O88895 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac3O88895 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac3O88895 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac3O88895 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac3O88895 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Hdac3O88895 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac3O88895 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac3O88895 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Hdac3O88895 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Hdac3O88895 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac3O88895 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Hdac3O88895 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.51■□□□□ 0.39
Hdac3O88895 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.51■□□□□ 0.39
Hdac3O88895 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Hdac3O88895 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.51■□□□□ 0.39
Hdac3O88895 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac3O88895 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac3O88895 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.5■□□□□ 0.39
Hdac3O88895 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac3O88895 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac3O88895 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac3O88895 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac3O88895 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac3O88895 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac3O88895 Gm12922-201ENSMUST00000120626 809 ntBASIC17.5■□□□□ 0.39
Hdac3O88895 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac3O88895 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.5■□□□□ 0.39
Hdac3O88895 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac3O88895 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac3O88895 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.49■□□□□ 0.39
Hdac3O88895 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.49■□□□□ 0.39
Hdac3O88895 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
Hdac3O88895 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Hdac3O88895 Gm43530-201ENSMUST00000195920 274 ntBASIC17.49■□□□□ 0.39
Hdac3O88895 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac3O88895 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac3O88895 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac3O88895 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac3O88895 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.48■□□□□ 0.39
Hdac3O88895 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac3O88895 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.48■□□□□ 0.39
Hdac3O88895 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac3O88895 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.48■□□□□ 0.39
Hdac3O88895 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac3O88895 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac3O88895 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac3O88895 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.47■□□□□ 0.39
Hdac3O88895 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac3O88895 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac3O88895 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.47■□□□□ 0.39
Hdac3O88895 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.47■□□□□ 0.39
Hdac3O88895 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac3O88895 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms