Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3139J3QK78 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm3139J3QK78 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Gm3139J3QK78 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3139J3QK78 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Gm3139J3QK78 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Gm3139J3QK78 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Gm3139J3QK78 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3139J3QK78 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.73■□□□□ 0.75
Gm3139J3QK78 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3139J3QK78 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3139J3QK78 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3139J3QK78 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3139J3QK78 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3139J3QK78 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm3139J3QK78 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3139J3QK78 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3139J3QK78 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gm3139J3QK78 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3139J3QK78 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3139J3QK78 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.69■□□□□ 0.74
Gm3139J3QK78 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3139J3QK78 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3139J3QK78 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gm3139J3QK78 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.68■□□□□ 0.74
Gm3139J3QK78 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.68■□□□□ 0.74
Gm3139J3QK78 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3139J3QK78 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gm3139J3QK78 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3139J3QK78 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3139J3QK78 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3139J3QK78 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.68■□□□□ 0.74
Gm3139J3QK78 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3139J3QK78 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3139J3QK78 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.67■□□□□ 0.74
Gm3139J3QK78 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.67■□□□□ 0.74
Gm3139J3QK78 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3139J3QK78 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3139J3QK78 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3139J3QK78 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3139J3QK78 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3139J3QK78 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Gm3139J3QK78 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3139J3QK78 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3139J3QK78 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3139J3QK78 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3139J3QK78 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.66■□□□□ 0.74
Gm3139J3QK78 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.66■□□□□ 0.74
Gm3139J3QK78 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3139J3QK78 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3139J3QK78 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.66■□□□□ 0.74
Gm3139J3QK78 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3139J3QK78 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3139J3QK78 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.65■□□□□ 0.74
Gm3139J3QK78 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.65■□□□□ 0.74
Gm3139J3QK78 Gm18284-201ENSMUST00000172604 624 ntBASIC19.65■□□□□ 0.74
Gm3139J3QK78 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm3139J3QK78 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Gm3139J3QK78 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3139J3QK78 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3139J3QK78 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Gm3139J3QK78 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3139J3QK78 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3139J3QK78 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.65■□□□□ 0.74
Gm3139J3QK78 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms