Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NpcdF8VQB8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
NpcdF8VQB8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
NpcdF8VQB8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
NpcdF8VQB8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NpcdF8VQB8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NpcdF8VQB8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
NpcdF8VQB8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NpcdF8VQB8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
NpcdF8VQB8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.83■■□□□ 1.4
NpcdF8VQB8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
NpcdF8VQB8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NpcdF8VQB8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NpcdF8VQB8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NpcdF8VQB8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NpcdF8VQB8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NpcdF8VQB8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.82■■□□□ 1.4
NpcdF8VQB8 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.81■■□□□ 1.4
NpcdF8VQB8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NpcdF8VQB8 Gm43859-201ENSMUST00000200075 1412 ntBASIC23.81■■□□□ 1.4
NpcdF8VQB8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.81■■□□□ 1.4
NpcdF8VQB8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NpcdF8VQB8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
NpcdF8VQB8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NpcdF8VQB8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NpcdF8VQB8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.8■■□□□ 1.4
NpcdF8VQB8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.8■■□□□ 1.4
NpcdF8VQB8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.8■■□□□ 1.4
NpcdF8VQB8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NpcdF8VQB8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NpcdF8VQB8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NpcdF8VQB8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NpcdF8VQB8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NpcdF8VQB8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NpcdF8VQB8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.79■■□□□ 1.4
NpcdF8VQB8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC23.79■■□□□ 1.4
NpcdF8VQB8 Gm29241-201ENSMUST00000189260 1096 ntBASIC23.79■■□□□ 1.4
NpcdF8VQB8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NpcdF8VQB8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NpcdF8VQB8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NpcdF8VQB8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC23.78■■□□□ 1.4
NpcdF8VQB8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC23.78■■□□□ 1.4
NpcdF8VQB8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.78■■□□□ 1.4
NpcdF8VQB8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC23.78■■□□□ 1.4
NpcdF8VQB8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NpcdF8VQB8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NpcdF8VQB8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NpcdF8VQB8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NpcdF8VQB8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NpcdF8VQB8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NpcdF8VQB8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
NpcdF8VQB8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.76■■□□□ 1.39
NpcdF8VQB8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.76■■□□□ 1.39
NpcdF8VQB8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC23.76■■□□□ 1.39
NpcdF8VQB8 Gm37856-201ENSMUST00000191634 999 ntBASIC23.76■■□□□ 1.39
NpcdF8VQB8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC23.76■■□□□ 1.39
NpcdF8VQB8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NpcdF8VQB8 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.76■■□□□ 1.39
NpcdF8VQB8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NpcdF8VQB8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NpcdF8VQB8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NpcdF8VQB8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
NpcdF8VQB8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NpcdF8VQB8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.75■■□□□ 1.39
NpcdF8VQB8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
NpcdF8VQB8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NpcdF8VQB8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NpcdF8VQB8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NpcdF8VQB8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NpcdF8VQB8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
NpcdF8VQB8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NpcdF8VQB8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NpcdF8VQB8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
NpcdF8VQB8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NpcdF8VQB8 Gm13181-201ENSMUST00000120117 1069 ntBASIC23.74■■□□□ 1.39
NpcdF8VQB8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.74■■□□□ 1.39
NpcdF8VQB8 Gm6365-201ENSMUST00000054711 744 ntBASIC23.74■■□□□ 1.39
NpcdF8VQB8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NpcdF8VQB8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
NpcdF8VQB8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NpcdF8VQB8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NpcdF8VQB8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NpcdF8VQB8 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.73■■□□□ 1.39
NpcdF8VQB8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NpcdF8VQB8 Gm13836-201ENSMUST00000121159 501 ntBASIC23.73■■□□□ 1.39
NpcdF8VQB8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NpcdF8VQB8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NpcdF8VQB8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NpcdF8VQB8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
NpcdF8VQB8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NpcdF8VQB8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NpcdF8VQB8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
NpcdF8VQB8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.71■■□□□ 1.39
NpcdF8VQB8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NpcdF8VQB8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.71■■□□□ 1.39
NpcdF8VQB8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
NpcdF8VQB8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.71■■□□□ 1.39
NpcdF8VQB8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NpcdF8VQB8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
NpcdF8VQB8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms