Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.46■□□□□ 0.71
Srp54bE9PXC0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.46■□□□□ 0.71
Srp54bE9PXC0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.46■□□□□ 0.71
Srp54bE9PXC0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Srp54bE9PXC0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srp54bE9PXC0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srp54bE9PXC0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Srp54bE9PXC0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srp54bE9PXC0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srp54bE9PXC0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Srp54bE9PXC0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Srp54bE9PXC0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Srp54bE9PXC0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Srp54bE9PXC0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srp54bE9PXC0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 AV356131-201ENSMUST00000206201 750 ntBASIC19.44■□□□□ 0.7
Srp54bE9PXC0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Gm9988-201ENSMUST00000069786 435 ntBASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54bE9PXC0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54bE9PXC0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54bE9PXC0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54bE9PXC0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Srp54bE9PXC0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54bE9PXC0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.43■□□□□ 0.7
Srp54bE9PXC0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54bE9PXC0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Srp54bE9PXC0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Srp54bE9PXC0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp54bE9PXC0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp54bE9PXC0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp54bE9PXC0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Srp54bE9PXC0 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.42■□□□□ 0.7
Srp54bE9PXC0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54bE9PXC0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Gm27801-201ENSMUST00000184174 223 ntBASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Gm37179-201ENSMUST00000194862 823 ntBASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54bE9PXC0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Srp54bE9PXC0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Srp54bE9PXC0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Srp54bE9PXC0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54bE9PXC0 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.39■□□□□ 0.69
Srp54bE9PXC0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Srp54bE9PXC0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.39■□□□□ 0.69
Srp54bE9PXC0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54bE9PXC0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54bE9PXC0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
Srp54bE9PXC0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54bE9PXC0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54bE9PXC0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54bE9PXC0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Srp54bE9PXC0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Srp54bE9PXC0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Srp54bE9PXC0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp54bE9PXC0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.38■□□□□ 0.69
Srp54bE9PXC0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp54bE9PXC0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp54bE9PXC0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp54bE9PXC0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp54bE9PXC0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Srp54bE9PXC0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54bE9PXC0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54bE9PXC0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54bE9PXC0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.37■□□□□ 0.69
Srp54bE9PXC0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.37■□□□□ 0.69
Srp54bE9PXC0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms