Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC31.95■■■□□ 2.7
Shroom2A2ALU4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC31.95■■■□□ 2.7
Shroom2A2ALU4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Shroom2A2ALU4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Shroom2A2ALU4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Shroom2A2ALU4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Shroom2A2ALU4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Shroom2A2ALU4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Shroom2A2ALU4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Shroom2A2ALU4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
Shroom2A2ALU4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Shroom2A2ALU4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC31.93■■■□□ 2.7
Shroom2A2ALU4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC31.93■■■□□ 2.7
Shroom2A2ALU4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Shroom2A2ALU4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Shroom2A2ALU4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Shroom2A2ALU4 Gm10571-201ENSMUST00000097869 1638 ntBASIC31.92■■■□□ 2.7
Shroom2A2ALU4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
Shroom2A2ALU4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
Shroom2A2ALU4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC31.92■■■□□ 2.7
Shroom2A2ALU4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC31.92■■■□□ 2.7
Shroom2A2ALU4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Shroom2A2ALU4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Shroom2A2ALU4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Shroom2A2ALU4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Shroom2A2ALU4 Gm13534-201ENSMUST00000121169 513 ntBASIC31.91■■■□□ 2.7
Shroom2A2ALU4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Shroom2A2ALU4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Shroom2A2ALU4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Shroom2A2ALU4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Shroom2A2ALU4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Shroom2A2ALU4 CT030146.1-201ENSMUST00000220919 217 ntBASIC31.91■■■□□ 2.7
Shroom2A2ALU4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Shroom2A2ALU4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Shroom2A2ALU4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Shroom2A2ALU4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC31.9■■■□□ 2.7
Shroom2A2ALU4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC31.9■■■□□ 2.7
Shroom2A2ALU4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC31.9■■■□□ 2.7
Shroom2A2ALU4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Shroom2A2ALU4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Shroom2A2ALU4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
Shroom2A2ALU4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Shroom2A2ALU4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
Shroom2A2ALU4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.69
Shroom2A2ALU4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Shroom2A2ALU4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC31.88■■■□□ 2.69
Shroom2A2ALU4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC31.88■■■□□ 2.69
Shroom2A2ALU4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC31.87■■■□□ 2.69
Shroom2A2ALU4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Shroom2A2ALU4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC31.87■■■□□ 2.69
Shroom2A2ALU4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Shroom2A2ALU4 Gm12896-201ENSMUST00000118430 226 ntBASIC31.86■■■□□ 2.69
Shroom2A2ALU4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC31.86■■■□□ 2.69
Shroom2A2ALU4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Shroom2A2ALU4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Shroom2A2ALU4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Shroom2A2ALU4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Shroom2A2ALU4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC31.84■■■□□ 2.69
Shroom2A2ALU4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Shroom2A2ALU4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Shroom2A2ALU4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Shroom2A2ALU4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Shroom2A2ALU4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Shroom2A2ALU4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Shroom2A2ALU4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Shroom2A2ALU4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Shroom2A2ALU4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Shroom2A2ALU4 Gm10698-201ENSMUST00000182663 604 ntBASIC31.83■■■□□ 2.69
Shroom2A2ALU4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Shroom2A2ALU4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Shroom2A2ALU4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Shroom2A2ALU4 Gm10517-202ENSMUST00000192970 758 ntBASIC31.82■■■□□ 2.68
Shroom2A2ALU4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
Shroom2A2ALU4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Shroom2A2ALU4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
Shroom2A2ALU4 Gm11249-201ENSMUST00000117071 859 ntBASIC31.8■■■□□ 2.68
Shroom2A2ALU4 Gm6433-201ENSMUST00000118634 875 ntBASIC31.8■■■□□ 2.68
Shroom2A2ALU4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
Shroom2A2ALU4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC31.8■■■□□ 2.68
Shroom2A2ALU4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC31.8■■■□□ 2.68
Shroom2A2ALU4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Shroom2A2ALU4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC31.8■■■□□ 2.68
Shroom2A2ALU4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Shroom2A2ALU4 Mir1199-201ENSMUST00000117015 119 ntBASIC31.79■■■□□ 2.68
Shroom2A2ALU4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms