Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl9-ps6A0A140T8T4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.3■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.3■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.3■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.3■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.29■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.28■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Gm18284-201ENSMUST00000172604 624 ntBASIC20.28■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.28■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpl9-ps6A0A140T8T4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.28■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.28■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rpl9-ps6A0A140T8T4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.26■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.26■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.26■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.26■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.24■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gm8495-201ENSMUST00000188740 694 ntBASIC20.24■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 AA386476-201ENSMUST00000098781 1665 ntBASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rpl9-ps6A0A140T8T4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms