Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv12-1A0A0B4J1H0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.52■□□□□ 0.4
Trbv12-1A0A0B4J1H0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.52■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Gm43173-201ENSMUST00000202246 593 ntBASIC17.52■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Gm6139-201ENSMUST00000079261 882 ntBASIC17.52■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Gm8493-201ENSMUST00000196881 489 ntBASIC17.51■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-1A0A0B4J1H0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.49■□□□□ 0.39
Trbv12-1A0A0B4J1H0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv12-1A0A0B4J1H0 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.49■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Serp2-204ENSMUST00000228055 705 ntBASIC17.49■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.49■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Smad6-203ENSMUST00000179458 273 ntBASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv12-1A0A0B4J1H0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Trbv12-1A0A0B4J1H0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.44■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv12-1A0A0B4J1H0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv12-1A0A0B4J1H0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms